RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 LIMS4P0CW20 117 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 DDCP20711 480 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 KELP23276 732 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 ENTPD8Q5MY95 495 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 C1orf94Q6P1W5 598 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 C6orf120Q7Z4R8 191 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 C11orf74Q86VG3 221 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 LINC00471Q8N535 108 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 C2orf73Q8N5S3 287 aaPredicted RBP17.61■□□□□ 0.41
MSLN-202ENST00000545450 ZNF740Q8NDX6 193 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 HMGB4Q8WW32 186 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 ASB12Q8WXK4 309 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 HYLS1Q96M11 299 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 COQ7Q99807 217 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 BTBD1Q9H0C5 482 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 GALNT9Q9HCQ5 603 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 FGF22Q9HCT0 170 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 SLC2A4RGQ9NR83 387 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 B3GNT2Q9NY97 397 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 SEC14L3Q9UDX4 400 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 PHF11Q9UIL8 331 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 MOSPD1Q9UJG1 213 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 CCDC88CQ9P219 2028 aa17.61■□□□□ 0.41
MSLN-202ENST00000545450 LOC102723532A0A0G2JNH3 316 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 LEUTXA8MZ59 168 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 SCAMP1O15126 338 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 PLOD3O60568 738 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 SLC35G4P0C7Q5 338 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 OR12D1P0DN82 309 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 EVI2BP34910 448 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 MTNR1AP48039 350 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 MANFP55145 182 aaKnown RBP17.6■□□□□ 0.41
MSLN-202ENST00000545450 MINDY4Q4G0A6 757 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 MRGPREQ86SM8 312 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 COMTD1Q86VU5 262 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 TBC1D19Q8N5T2 526 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 AKAP1Q92667 903 aaKnown RBP eCLIP17.6■□□□□ 0.41
MSLN-202ENST00000545450 CREB3L1Q96BA8 519 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 CLIP3Q96DZ5 547 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 MSANTD3Q96H12 275 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 TIMM29Q9BSF4 260 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 ZNF717Q9BY31 904 aaPredicted RBP17.6■□□□□ 0.41
MSLN-202ENST00000545450 MAN2C1Q9NTJ4 1040 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 SLC23A1Q9UHI7 598 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 TEKT2Q9UIF3 430 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 ACSL5Q9ULC5 683 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 SNTNA6NMZ2 147 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 INMT-MINDY4F8WBC2 141 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 SHOXO15266 292 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 MAPK12P53778 367 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 TDGQ13569 410 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 TYW3Q6IPR3 259 aaKnown RBP17.6■□□□□ 0.41
MSLN-202ENST00000545450 SLC36A4Q6YBV0 504 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 SLC9B2Q86UD5 537 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 C9orf62Q8N4C0 152 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 MORN4Q8NDC4 146 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 DCLRE1CQ96SD1 692 aaKnown RBP17.6■□□□□ 0.41
MSLN-202ENST00000545450 TREX2Q9BQ50 279 aaPredicted RBP17.6■□□□□ 0.41
MSLN-202ENST00000545450 MENTQ9BUN1 341 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 FNDC11Q9BVV2 318 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 NEUROD4Q9HD90 331 aa17.6■□□□□ 0.41
MSLN-202ENST00000545450 PRR19A6NJB7 356 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 SH3BP5O60239 455 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 TBX19O60806 448 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 ERGP11308 486 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 CD79BP40259 229 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 AVPR1BP47901 424 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 AP2S1P53680 142 aaPredicted RBP17.59■□□□□ 0.41
MSLN-202ENST00000545450 LSM11P83369 360 aaKnown RBP eCLIP17.59■□□□□ 0.41
MSLN-202ENST00000545450 MRPL28Q13084 256 aaKnown RBP17.59■□□□□ 0.41
MSLN-202ENST00000545450 MZT2AQ6P582 158 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 AMIGO1Q86WK6 493 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 KIF18BQ86Y91 864 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 ADGRF3Q8IZF5 1079 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 ZFP41Q8N8Y5 198 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 SLC37A3Q8NCC5 494 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 MARVELD3Q96A59 401 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 GFM1Q96RP9 751 aaKnown RBP17.59■□□□□ 0.41
MSLN-202ENST00000545450 INSM2Q96T92 566 aaPredicted RBP17.59■□□□□ 0.41
MSLN-202ENST00000545450 SIRT3Q9NTG7 399 aaPredicted RBP17.59■□□□□ 0.41
MSLN-202ENST00000545450 ASB4Q9Y574 426 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 SHISA3A0PJX4 238 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 PRAMEF27A3QJZ7 478 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 ISM1B1AKI9 464 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.59■□□□□ 0.41
MSLN-202ENST00000545450 M0R3H8 397 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 LALBAP00709 142 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 CFL1P23528 166 aaKnown RBP17.59■□□□□ 0.41
MSLN-202ENST00000545450 UQCRC1P31930 480 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 AGFG1P52594 562 aaKnown RBP17.59■□□□□ 0.41
MSLN-202ENST00000545450 BTG1P62324 171 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 MLF2Q15773 248 aaPredicted RBP17.59■□□□□ 0.41
MSLN-202ENST00000545450 CCNJQ5T5M9 372 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 IQCHQ86VS3 1027 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 NATD1Q8N6N6 113 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 SMPDL3AQ92484 453 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 SLC9A6Q92581 669 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 UBE2E3Q969T4 207 aa17.59■□□□□ 0.41
MSLN-202ENST00000545450 SCARF2Q96GP6 870 aaPredicted RBP17.59■□□□□ 0.41
MSLN-202ENST00000545450 C12orf66Q96MD2 445 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms