RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PCDHGB3Q9Y5G1 929 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 TEX15Q9BXT5 2789 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 ANKRD17O75179 2603 aaKnown RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 TRGV5A0A0B4J1U4 118 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 ATP6AP2A0A1C7CYW4 349 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 FRG2CA6NGY1 282 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 NPIPA2E9PIF3 369 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 NPIPA3F8WFD2 350 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 TO15178 435 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 ZNF500O60304 480 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 TRIM13O60858 407 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 WDR1O75083 606 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 ATP6AP2O75787 350 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 PDE9AO76083 593 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 SNX4O95219 450 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 SLU7O95391 586 aaKnown RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 ABCB1P08183 1280 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 DBHP09172 617 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 ANXA4P09525 319 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 IFI6P09912 130 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 NEFHP12036 1026 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 JUNBP17275 347 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 DRD5P21918 477 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 ELAVL4P26378 380 aaKnown RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 ACVR2AP27037 513 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 PPICP45877 212 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 MAN2A2P49641 1150 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 EMDP50402 254 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 MRPS35P82673 323 aaKnown RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 IFFO1Q0D2I5 559 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 PLCXD2Q0VAA5 305 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 SLC10A1Q14973 349 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 EXOSC7Q15024 291 aaKnown RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 CDSNQ15517 529 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 LTB4RQ15722 352 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 NNATQ16517 81 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 ERCC6LQ2NKX8 1250 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 EMC4Q5J8M3 183 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 SPDYAQ5MJ70 313 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 KANK2Q63ZY3 851 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 FAM180BQ6P0A1 224 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 FAM111BQ6SJ93 734 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 TMEM64Q6YI46 380 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 C3P1Q6ZMU1 363 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 NCCRP1Q6ZVX7 275 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 C10orf107Q8IVU9 208 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 SRRM1Q8IYB3 904 aaKnown RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 FAM9CQ8IZT9 166 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 MREGQ8N565 214 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 BANPQ8N9N5 519 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 OR52R1Q8NGF1 315 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 OR5M3Q8NGP4 307 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 OR9A2Q8NGT5 310 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 CA5BP1Q8WTZ4 195 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 ASB5Q8WWX0 329 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 EXOSC8Q96B26 276 aaKnown RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 SDCCAG3Q96C92 435 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 NTNG2Q96CW9 530 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 ZNF764Q96H86 408 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 TMEM41AQ96HV5 264 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 LCORQ96JN0 433 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 RILPQ96NA2 401 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 ANGPTL4Q9BY76 406 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 ROPN1BQ9BZX4 212 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 STMN4Q9H169 189 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 UBQLN3Q9H347 655 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 C12orf65Q9H3J6 166 aaKnown RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 ROPN1Q9HAT0 212 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-223ENST00000545440 TNFRSF12AQ9NP84 129 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 MIEF1Q9NQG6 463 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 PFDN4Q9NQP4 134 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 SLC35C2Q9NQQ7 365 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 PNPLA3Q9NST1 481 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 TAS2R7Q9NYW3 318 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 SENP1Q9P0U3 644 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 BCAP29Q9UHQ4 241 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 CBLCQ9ULV8 474 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 C15orf41Q9Y2V0 281 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 CCL27Q9Y4X3 112 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 MPDZO75970 2070 aa7.02□□□□□ -1.29
SNHG1-223ENST00000545440 HEATR5AQ86XA9 2040 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 ANKHD1Q8IWZ3 2542 aaKnown RBP7.01□□□□□ -1.29
SNHG1-223ENST00000545440 ADGRG4Q8IZF6 3080 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 A0A087WV62 115 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 ZC3H12DA2A288 527 aaKnown RBP7.01□□□□□ -1.29
SNHG1-223ENST00000545440 OR6C70A6NIJ9 312 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 NOTOA8MTQ0 251 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 MYO1GB0I1T2 1018 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 SLC28A1O00337 649 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 AZIN1O14977 448 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 PLOD3O60568 738 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 COQ9O75208 318 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 LRATO95237 230 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 CHEK2O96017 543 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 HPNP05981 417 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 HOXD4P09016 255 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-223ENST00000545440 RFPL3SP0C7P2 107 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 GABRA1P14867 456 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 GDF1P27539 372 aa7.01□□□□□ -1.29
SNHG1-223ENST00000545440 CHRNB4P30926 498 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms