RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 OR5M10Q6IEU7 315 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 SPATA19Q7Z5L4 167 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 IFNEQ86WN2 208 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 WDR75Q8IWA0 830 aaKnown RBP14.32□□□□□ -0.12
CCDC78-216ENST00000544996 RPRMLQ8N4K4 120 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 COX18Q8N8Q8 333 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 OR8J2Q8NGG1 315 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 SFXN5Q8TD22 340 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 ABTB1Q969K4 478 aaPredicted RBP14.32□□□□□ -0.12
CCDC78-216ENST00000544996 STACQ99469 402 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 YIPF4Q9BSR8 244 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 G6PC3Q9BUM1 346 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 ACTRT3Q9BYD9 372 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 RUBCNLQ9H714 662 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 CXorf36Q9H7Y0 433 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 VIPAS39Q9H9C1 493 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 HHATLQ9HCP6 504 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 DUSP22Q9NRW4 184 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 GIN1Q9NXP7 522 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 TAS2R10Q9NYW0 307 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 DKKL1Q9UK85 242 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 MRPS18CQ9Y3D5 142 aaKnown RBP14.32□□□□□ -0.12
CCDC78-216ENST00000544996 MYO7BQ6PIF6 2116 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 EML6Q6ZMW3 1958 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 RNASET2O00584 256 aaKnown RBP14.31□□□□□ -0.12
CCDC78-216ENST00000544996 SDHDO14521 159 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 KCNK2O95069 426 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 UTS2O95399 124 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 GLI4P10075 376 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 H2AFXP16104 143 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-216ENST00000544996 BMP7P18075 431 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 DPP4P27487 766 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 CHRNB4P30926 498 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 SOAT1P35610 550 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 NUP107P57740 925 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 HBA1P69905 142 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 STX5Q13190 355 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 DPY19L1Q2PZI1 675 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 ZNF787Q6DD87 383 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 RTL6Q6ICC9 239 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 OR4F3Q6IEY1 312 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 ULK2Q8IYT8 1036 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 PIWIL2Q8TC59 973 aaKnown RBP14.31□□□□□ -0.12
CCDC78-216ENST00000544996 ADAMTS15Q8TE58 950 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 ZNF75CPQ92670 426 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-216ENST00000544996 TESCQ96BS2 214 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 BTBD2Q9BX70 525 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 UGT2B28Q9BY64 529 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 OR2B2Q9GZK3 357 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 PIGUQ9H490 435 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 WDR55Q9H6Y2 383 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-216ENST00000544996 PTGES2Q9H7Z7 377 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 FLRT3Q9NZU0 649 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 FBXL2Q9UKC9 423 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 FAM215AQ9Y5M1 114 aa14.31□□□□□ -0.12
CCDC78-216ENST00000544996 UTP20O75691 2785 aaKnown RBP14.31□□□□□ -0.12
CCDC78-216ENST00000544996 GOLGA8QA0A0J9YX86 632 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 PRSS51A0A1B0GVH4 220 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 GOLGA8OA6NCC3 632 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 HMGB1P1B2RPK0 211 aaPredicted RBP14.3□□□□□ -0.12
CCDC78-216ENST00000544996 GOLGA8NF8WBI6 632 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 ANKRD28O15084 1053 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 HNRNPRO43390 633 aaKnown RBP14.3□□□□□ -0.12
CCDC78-216ENST00000544996 IGKV1D-16P01601 117 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 HPGDP15428 266 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 EPHA3P29320 983 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 LCN1P31025 176 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 DSCR4P56555 118 aaPredicted RBP14.3□□□□□ -0.12
CCDC78-216ENST00000544996 POU6F2P78424 691 aaPredicted RBP14.3□□□□□ -0.12
CCDC78-216ENST00000544996 C17orf67Q0P5P2 114 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.3□□□□□ -0.12
CCDC78-216ENST00000544996 GRAMD1BQ3KR37 738 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 EXOSC6Q5RKV6 272 aaKnown RBP14.3□□□□□ -0.12
CCDC78-216ENST00000544996 NXNQ6DKJ4 435 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 CDC73Q6P1J9 531 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 AAGABQ6PD74 315 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 FIGNL1Q6PIW4 674 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 ENPP6Q6UWR7 440 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 MARCH3Q86UD3 253 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 FAM110BQ8TC76 370 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 LRRC8CQ8TDW0 803 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 DUSP19Q8WTR2 217 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 DYDC1Q8WWB3 177 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 PRDM14Q9GZV8 571 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 DSN1Q9H410 356 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 UBQLN4Q9NRR5 601 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 AIG1Q9NVV5 245 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 CAMK2AQ9UQM7 478 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 RNF6Q9Y252 685 aa14.3□□□□□ -0.12
CCDC78-216ENST00000544996 NINQ8N4C6 2090 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 GTF3C1Q12789 2109 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 E9PBE3 544 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 ANGPTL1O95841 491 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 NGFRP08138 427 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 ALDOCP09972 364 aaKnown RBP14.29□□□□□ -0.12
CCDC78-216ENST00000544996 ATP6V1C1P21283 382 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 TBXA2RP21731 343 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 S100A3P33764 101 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 RCAN2Q14206 197 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 CDSNQ15517 529 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms