RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 GTDC1Q4AE62 458 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 C6orf10Q5SRN2 563 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 TMEM64Q6YI46 380 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 ZNF621Q6ZSS3 439 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 MSANTD1Q6ZTZ1 278 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 MTERF4Q7Z6M4 381 aaKnown RBP11.43□□□□□ -0.58
ACTN1-206ENST00000544964 CDH24Q86UP0 819 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 SNX32Q86XE0 403 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 TREML1Q86YW5 311 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 CCDC197Q8NCU1 140 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 OR5L2Q8NGL0 311 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 GOT1L1Q8NHS2 421 aaPredicted RBP11.43□□□□□ -0.58
ACTN1-206ENST00000544964 NUBPLQ8TB37 319 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 BCAS4Q8TDM0 211 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 ASB15Q8WXK1 588 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 GTF2H4Q92759 462 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 ADIPOR1Q96A54 375 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 GIMAP5Q96F15 307 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 OTUB1Q96FW1 271 aaPredicted RBP11.43□□□□□ -0.58
ACTN1-206ENST00000544964 C16orf58Q96GQ5 468 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 ITCHQ96J02 903 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 YIPF4Q9BSR8 244 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 DEFB127Q9H1M4 99 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 SLC6A13Q9NSD5 602 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 PRODH2Q9UF12 536 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 ITGB1BP2Q9UKP3 347 aa11.43□□□□□ -0.58
ACTN1-206ENST00000544964 ZNF469Q96JG9 3925 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-206ENST00000544964 RNF103-CHMP3A0A140T963 221 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 LOC100653049A0A140TA62 436 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 FBP2O00757 339 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 ANGPT2O15123 496 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 ERN1O75460 977 aaKnown RBP11.42□□□□□ -0.58
ACTN1-206ENST00000544964 KRT34O76011 436 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 IGHG3P01860 377 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 HMGN2P05204 90 aaKnown RBP11.42□□□□□ -0.58
ACTN1-206ENST00000544964 IFI6P09912 130 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 UQCRC2P22695 453 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 MSX1P28360 303 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 ADSLP30566 484 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-206ENST00000544964 CHRNB4P30926 498 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 CASP9P55211 416 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 RIPPLY3P57055 190 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 CORO7P57737 925 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 NUP107P57740 925 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 PPIAP62937 165 aaKnown RBP11.42□□□□□ -0.58
ACTN1-206ENST00000544964 PRR5P85299 388 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 FOXO1Q12778 655 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 IL20RBQ6UXL0 311 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 NPSR1Q6W5P4 371 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 C6orf120Q7Z4R8 191 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 RETREG3Q86VR2 466 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 POU5F2Q8N7G0 328 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 ANKS4BQ8N8V4 417 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 ZNF441Q8N8Z8 693 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 OR56A1Q8NGH5 318 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 LILRB4Q8NHJ6 448 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 SFXN5Q8TD22 340 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 MOAP1Q96BY2 351 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 VSTM2LQ96N03 204 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 MS4A4EQ96PG1 132 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 SLC35A5Q9BS91 424 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 UCK2Q9BZX2 261 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 PAIP1Q9H074 479 aaKnown RBP11.42□□□□□ -0.58
ACTN1-206ENST00000544964 NXF5Q9H1B4 397 aaKnown RBP11.42□□□□□ -0.58
ACTN1-206ENST00000544964 PNPLA3Q9NST1 481 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 MRGBPQ9NV56 204 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 SLAMF8Q9P0V8 285 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 NTMQ9P121 344 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 LEF1Q9UJU2 399 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-206ENST00000544964 CFL2Q9Y281 166 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 NDUFAF1Q9Y375 327 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 FAM215AQ9Y5M1 114 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 NINQ8N4C6 2090 aa11.42□□□□□ -0.58
ACTN1-206ENST00000544964 NUP214P35658 2090 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-206ENST00000544964 ACOT7O00154 380 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 SLC22A2O15244 555 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 DCTN3O75935 186 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 NADKO95544 446 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-206ENST00000544964 CELA3AP09093 270 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 CCL3P10147 92 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 ACP2P11117 423 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 COX4I1P13073 169 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 PTPN6P29350 595 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 CHI3L1P36222 383 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-206ENST00000544964 PPICP45877 212 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 TRPC1P48995 793 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 RPS26P62854 115 aaKnown RBP11.41□□□□□ -0.58
ACTN1-206ENST00000544964 PSG6Q00889 435 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 PLGLB1Q02325 96 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 LASP1Q14847 261 aaKnown RBP11.41□□□□□ -0.58
ACTN1-206ENST00000544964 MAPRE2Q15555 327 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 TMEM211Q6ICI0 200 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 MFSD12Q6NUT3 480 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 ANGPTL8Q6UXH0 198 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 SPNS3Q6ZMD2 512 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 RTL4Q6ZR62 310 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 SLC22A16Q86VW1 577 aa11.41□□□□□ -0.58
ACTN1-206ENST00000544964 CCDC71Q8IV32 467 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-206ENST00000544964 SLC44A2Q8IWA5 706 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-206ENST00000544964 PRR22Q8IZ63 422 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms