RNA–Protein interactions for RNA: ENST00000544733.5

MAP3K4-216, Transcript of mitogen-activated protein kinase kinase kinase 4, human

TSL 3

Gene MAP3K4, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MAP3K4-216	ENST00000544733	SERPINB4	P48594	390 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CLK3	P49761	638 aa	Known RBP	11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	DGKQ	P52824	942 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	PSMD4	P55036	377 aa	Known RBP	11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	GFRA1	P56159	465 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	PTGR1	Q14914	329 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	XKR7	Q5GH72	579 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CES4A	Q5XG92	561 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	AAGAB	Q6PD74	315 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	ARSK	Q6UWY0	536 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	MARCH3	Q86UD3	253 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	NUDCD3	Q8IVD9	361 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	ZZZ3	Q8IYH5	903 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	FNDC5	Q8NAU1	212 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	OR2M3	Q8NG83	312 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	NUDT8	Q8WV74	236 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	RNF138	Q8WVD3	245 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	DTNBP1	Q96EV8	351 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CHMP6	Q96FZ7	201 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	PPP1R36	Q96LQ0	422 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	YIPF4	Q9BSR8	244 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	TMEM109	Q9BVC6	243 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	RTN4R	Q9BZR6	473 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	C3orf14	Q9HBI5	128 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	MRTO4	Q9UKD2	239 aa	Known RBP	11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	HIVEP1	P15822	2718 aa		11.76	□□□□□ -0.53
MAP3K4-216	ENST00000544733	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	MBD3L3	A6NE82	208 aa	Predicted RBP	11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CD8B2	A6NJW9	211 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CLCA1	A8K7I4	914 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	EEF1E1-BLOC1S5	C9J1V9	151 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	EEF1E1	O43324	174 aa	Known RBP	11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	EMC8	O43402	210 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	ITM2A	O43736	263 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	ZIC3	O60481	467 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	ZWINT	O95229	277 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	HSPA4L	O95757	839 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CPN1	P15169	458 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	LHX2	P50458	406 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	ASCL1	P50553	236 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	DSCR4	P56555	118 aa	Predicted RBP	11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CHI3L2	Q15782	390 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	GRAMD1B	Q3KR37	738 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	C6orf136	Q5SQH8	315 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CEP85L	Q5SZL2	805 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	IL23R	Q5VWK5	629 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	RAET1L	Q5VY80	246 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	FIGNL1	Q6PIW4	674 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	UBQLNL	Q8IYU4	475 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	KRTCAP2	Q8N6L1	136 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	FADS6	Q8N9I5	356 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	OR5M1	Q8NGP8	315 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CEP70	Q8NHQ1	597 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	ZPLD1	Q8TCW7	415 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	DUSP19	Q8WTR2	217 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	JADE3	Q92613	823 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	TUBGCP3	Q96CW5	907 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	C16orf58	Q96GQ5	468 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	ZNF764	Q96H86	408 aa	Predicted RBP	11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	MS4A4E	Q96PG1	132 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	SH3GL2	Q99962	352 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	TBL1XR1	Q9BZK7	514 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CALHM2	Q9HA72	323 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	SDHAF3	Q9NRP4	125 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	FAM120C	Q9NX05	1096 aa	Known RBP	11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	KCNN3	Q9UGI6	736 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	ATP6V1H	Q9UI12	483 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	ABCG2	Q9UNQ0	655 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	L3MBTL1	Q9Y468	752 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	SNX8	Q9Y5X2	465 aa		11.75	□□□□□ -0.53
MAP3K4-216	ENST00000544733	ITPR3	Q14573	2671 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	TTC36	A6NLP5	189 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	NKX2-2	O95096	273 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	ANGPTL1	O95841	491 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	IFI6	P09912	130 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	LAMP1	P11279	417 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CTSS	P25774	331 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	FRK	P42685	505 aa	Predicted RBP	11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CLDN18	P56856	261 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	FOXF2	Q12947	444 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	PDCD2	Q16342	344 aa	Predicted RBP	11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	DUSP5	Q16690	384 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	VPS26B	Q4G0F5	336 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CPTP	Q5TA50	214 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	POMZP3	Q6PJE2	187 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	LRIG3	Q6UXM1	1119 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CDH24	Q86UP0	819 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	HOMEZ	Q8IX15	550 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	GCNT2	Q8N0V5	402 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	CDRT4	Q8N9R6	151 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	GATS	Q8NAP1	163 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	SLC16A11	Q8NCK7	471 aa		11.74	□□□□□ -0.53
MAP3K4-216	ENST00000544733	INTS12	Q96CB8	462 aa	Known RBP	11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms