RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 MTNR1BP49286 362 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 RAB8AP61006 207 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 MXD1Q05195 221 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 GAS6Q14393 721 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 TIGD3Q6B0B8 471 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 PLET1Q6UQ28 207 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 GDF7Q7Z4P5 450 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 TPRA1Q86W33 373 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 VRK2Q86Y07 508 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 CACTIN-AS1Q8N1I8 211 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 CDRT4Q8N9R6 151 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 ZNF485Q8NCK3 441 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 OR14C36Q8NHC7 312 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 SLC2A12Q8TD20 617 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 DNAJA4Q8WW22 397 aaPredicted RBP12.18□□□□□ -0.46
CPSF7-223ENST00000544669 GIMAP5Q96F15 307 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 SLC35A4Q96G79 324 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 LRFN5Q96NI6 719 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 TRMT61BQ9BVS5 477 aaKnown RBP12.18□□□□□ -0.46
CPSF7-223ENST00000544669 TMEM106CQ9BVX2 250 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 PLA2G12AQ9BZM1 189 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 SRMSQ9H3Y6 488 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 DDX28Q9NUL7 540 aaKnown RBP12.18□□□□□ -0.46
CPSF7-223ENST00000544669 RABL2AQ9UBK7 228 aaPredicted RBP12.18□□□□□ -0.46
CPSF7-223ENST00000544669 APOBEC3BQ9UH17 382 aaKnown RBP12.18□□□□□ -0.46
CPSF7-223ENST00000544669 RABL2BQ9UNT1 228 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 ENTPD2Q9Y5L3 495 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 FAM221BA6H8Z2 402 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 UNC119BA6NIH7 251 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 WWP2O00308 870 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 TNFRSF10CO14798 259 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 YES1P07947 543 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 GSTT2P0CG29 244 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 GSTT2BP0CG30 244 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 ALPPL2P10696 532 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 SLC2A2P11168 524 aaPredicted RBP12.18□□□□□ -0.46
CPSF7-223ENST00000544669 MAGP20916 626 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 FCARP24071 287 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 TALDO1P37837 337 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 RPS25P62851 125 aaKnown RBP12.18□□□□□ -0.46
CPSF7-223ENST00000544669 MRPS15P82914 257 aaKnown RBP12.18□□□□□ -0.46
CPSF7-223ENST00000544669 POU4F2Q12837 409 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 BAK1Q16611 211 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 BICRALQ6AI39 1079 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 TANGO2Q6ICL3 276 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 PAQR6Q6TCH4 344 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 PAMR1Q6UXH9 720 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 BCDIN3DQ7Z5W3 292 aaKnown RBP12.18□□□□□ -0.46
CPSF7-223ENST00000544669 ZNF619Q8N2I2 560 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 CELF2-AS1Q8N7Q2 184 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 SIMC1Q8NDZ2 872 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 NEIL3Q8TAT5 605 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 UCN3Q969E3 161 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 ELSPBP1Q96BH3 223 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 TM4SF19Q96DZ7 209 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 RNF121Q9H920 327 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 TRIM36Q9NQ86 728 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 TIGARQ9NQ88 270 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 POU2F3Q9UKI9 436 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 CBLCQ9ULV8 474 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 C19orf53Q9UNZ5 99 aaPredicted RBP12.18□□□□□ -0.46
CPSF7-223ENST00000544669 LRRK1Q38SD2 2015 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 PTPRSQ13332 1948 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 PRSS38A1L453 326 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 CSF3P09919 207 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 C8orf89P0DMQ9 161 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 SMIM10L1P0DMW3 83 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 GNSP15586 552 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 MYL9P24844 172 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 NTSR1P30989 418 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 RFX2P48378 723 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 DAB2P98082 770 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 ADAM15Q13444 863 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 OR2G6Q5TZ20 316 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 FRRS1Q6ZNA5 592 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 MEPCEQ7L2J0 689 aaKnown RBP12.17□□□□□ -0.46
CPSF7-223ENST00000544669 CXXC5Q7LFL8 322 aaKnown RBP12.17□□□□□ -0.46
CPSF7-223ENST00000544669 COMTD1Q86VU5 262 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 NRMQ8IXM6 262 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 FBXL6Q8N531 539 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 C12orf76Q8N812 135 aaPredicted RBP12.17□□□□□ -0.46
CPSF7-223ENST00000544669 DUSP18Q8NEJ0 188 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 OR8D4Q8NGM9 314 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 GRPEL2Q8TAA5 225 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 CAPSLQ8WWF8 208 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 TM9SF4Q92544 642 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 TRIM63Q969Q1 353 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 TMEM203Q969S6 136 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 TRMT61AQ96FX7 289 aaKnown RBP12.17□□□□□ -0.46
CPSF7-223ENST00000544669 MRPL48Q96GC5 212 aaKnown RBP12.17□□□□□ -0.46
CPSF7-223ENST00000544669 SMIM10Q96HG1 83 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 C10orf90Q96M02 699 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 SECISBP2Q96T21 854 aaKnown RBP12.17□□□□□ -0.46
CPSF7-223ENST00000544669 SOSTQ9BQB4 213 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 MIXL1Q9H2W2 232 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 EQTNQ9NQ60 294 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 BABAM2Q9NXR7 383 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 CNIH4Q9P003 139 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 KLHL21Q9UJP4 597 aa12.17□□□□□ -0.46
CPSF7-223ENST00000544669 TBC1D3DA0A087WVF3 549 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms