RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 PHF19Q5T6S3 580 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 PWWP2BQ6NUJ5 590 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 APLFQ8IW19 511 aaPredicted RBP18.39■□□□□ 0.53
COPS7A-218ENST00000543939 PARP8Q8N3A8 854 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 SLC38A9Q8NBW4 561 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 SETD9Q8NE22 299 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 OR4N2Q8NGD1 307 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 PRR14Q9BWN1 585 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 TGIF2Q9GZN2 237 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 CTSFQ9UBX1 484 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 HSPE1-MOB4S4R3N1 261 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 IGLV3-12A0A075B6K2 115 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 TRIM64CA6NLI5 447 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 SCRG1O75711 98 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 RPL5P46777 297 aaKnown RBP18.38■□□□□ 0.53
COPS7A-218ENST00000543939 ELAVL1Q15717 326 aaKnown RBP18.38■□□□□ 0.53
COPS7A-218ENST00000543939 MEP1AQ16819 746 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 RNF220Q5VTB9 566 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 LAIR2Q6ISS4 152 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 PODNL1Q6PEZ8 512 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 HDAC2Q92769 488 aaKnown RBP18.38■□□□□ 0.53
COPS7A-218ENST00000543939 DIO2Q92813 273 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 RNF31Q96EP0 1072 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 HRASLS5Q96KN8 279 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 ITPAQ9BY32 194 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 VN1R1Q9GZP7 353 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 Q9N2J8 555 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 MGAT4BQ9UQ53 548 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 RALGAPA1Q6GYQ0 2036 aa18.38■□□□□ 0.53
COPS7A-218ENST00000543939 A8MUA0 341 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 LDOC1O95751 146 aaPredicted RBP18.37■□□□□ 0.53
COPS7A-218ENST00000543939 ADAP00813 363 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 CCNYL3P0C7X3 344 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 CDH15P55291 814 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 SLC37A1P57057 533 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 TAS2R41P59536 307 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 TUBA4AP68366 448 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 TRA2AQ13595 282 aaKnown RBP eCLIP18.37■□□□□ 0.53
COPS7A-218ENST00000543939 RBM48Q5RL73 367 aaKnown RBP18.37■□□□□ 0.53
COPS7A-218ENST00000543939 C6orf141Q5SZD1 244 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 LAPTM4BQ86VI4 370 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 ZSCAN1Q8NBB4 408 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 PLPP5Q8NEB5 264 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 GTPBP3Q969Y2 492 aaKnown RBP18.37■□□□□ 0.53
COPS7A-218ENST00000543939 APOL4Q9BPW4 351 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 CTPS2Q9NRF8 586 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 OCIAD1Q9NX40 245 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 TUBA8Q9NY65 449 aaPredicted RBP18.37■□□□□ 0.53
COPS7A-218ENST00000543939 CDHR4A6H8M9 788 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 AP3D1O14617 1153 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 DYRK3O43781 588 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 OR10H3O60404 316 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 DDAH2O95865 285 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 IGKV3-11P04433 115 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 POU2F1P14859 743 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 ZNF136P52737 540 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 ZFP36L1Q07352 338 aaKnown RBP18.37■□□□□ 0.53
COPS7A-218ENST00000543939 NSDHLQ15738 373 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 NKAIN1Q4KMZ8 207 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 FLYWCH1Q4VC44 716 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 MRPL2Q5T653 305 aaKnown RBP18.37■□□□□ 0.53
COPS7A-218ENST00000543939 PGBD2Q6P3X8 592 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 KLHL17Q6TDP4 642 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 PPP1R3BQ86XI6 285 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 CCDC71Q8IV32 467 aaPredicted RBP18.37■□□□□ 0.53
COPS7A-218ENST00000543939 PRSS58Q8IYP2 241 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 ZNF321PQ8N8H1 164 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 MORN4Q8NDC4 146 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 MCHR1Q99705 422 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 SEMA4GQ9NTN9 838 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 MKL2Q9ULH7 1088 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 CLCA3PQ9Y6N3 262 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 R4GN57 208 aa18.37■□□□□ 0.53
COPS7A-218ENST00000543939 A0A087WXM4 84 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 LNP1A1A4G5 178 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 CPSF4LA6NMK7 179 aaKnown RBP18.36■□□□□ 0.53
COPS7A-218ENST00000543939 CYP7B1O75881 506 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 ONECUT2O95948 504 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 GP1BAP07359 652 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 LINGO3P0C6S8 592 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 ACP1P24666 158 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 NR1H2P55055 460 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 HOXC5Q00444 222 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 IL5RAQ01344 420 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 CDK5R2Q13319 367 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 ENTPD8Q5MY95 495 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 ZNF385CQ66K41 422 aaPredicted RBP18.36■□□□□ 0.53
COPS7A-218ENST00000543939 B3GNT8Q7Z7M8 397 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 BPHLQ86WA6 291 aaPredicted RBP18.36■□□□□ 0.53
COPS7A-218ENST00000543939 LINC00471Q8N535 108 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 STT3BQ8TCJ2 826 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 SLC2A12Q8TD20 617 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 ZNF721Q8TF20 911 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 ATOH1Q92858 354 aaPredicted RBP18.36■□□□□ 0.53
COPS7A-218ENST00000543939 CLIP3Q96DZ5 547 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 SLC46A1Q96NT5 459 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 DGCR6LQ9BY27 220 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 ANKRD19PQ9H560 264 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 APMAPQ9HDC9 416 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 ENOPH1Q9UHY7 261 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms