RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 SLC15A1P46059 708 aa15.88■□□□□ 0.13
PTPRO-209ENST00000543886 GIPRP48546 466 aa15.88■□□□□ 0.13
PTPRO-209ENST00000543886 GFERP55789 205 aa15.88■□□□□ 0.13
PTPRO-209ENST00000543886 ZNHIT3Q15649 155 aaPredicted RBP15.88■□□□□ 0.13
PTPRO-209ENST00000543886 C14orf28Q4W4Y0 310 aa15.88■□□□□ 0.13
PTPRO-209ENST00000543886 MEDAGQ5VYS4 303 aa15.88■□□□□ 0.13
PTPRO-209ENST00000543886 SLC36A4Q6YBV0 504 aa15.88■□□□□ 0.13
PTPRO-209ENST00000543886 C17orf82Q86X59 251 aaPredicted RBP15.88■□□□□ 0.13
PTPRO-209ENST00000543886 SDR16C5Q8N3Y7 309 aa15.88■□□□□ 0.13
PTPRO-209ENST00000543886 TOR1AIP2Q8NFQ8 470 aa15.88■□□□□ 0.13
PTPRO-209ENST00000543886 OR6C4Q8NGE1 309 aa15.88■□□□□ 0.13
PTPRO-209ENST00000543886 FAM46AQ96IP4 442 aaKnown RBP15.88■□□□□ 0.13
PTPRO-209ENST00000543886 POLDIP3Q9BY77 421 aaKnown RBP15.88■□□□□ 0.13
PTPRO-209ENST00000543886 CAPN10Q9HC96 672 aa15.88■□□□□ 0.13
PTPRO-209ENST00000543886 CNIH4Q9P003 139 aa15.88■□□□□ 0.13
PTPRO-209ENST00000543886 EFCAB9A8MZ26 197 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 CLDN4O14493 209 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 FOXS1O43638 330 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 NSA2O95478 260 aaKnown RBP15.87■□□□□ 0.13
PTPRO-209ENST00000543886 CBX7O95931 251 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 NID1P14543 1247 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 C21orf59P57076 290 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 NCS1P62166 190 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 CDK5Q00535 292 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 MAP4K2Q12851 820 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 FAM53BQ14153 422 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 MAPK14Q16539 360 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 OCLNQ16625 522 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 MRPL2Q5T653 305 aaKnown RBP15.87■□□□□ 0.13
PTPRO-209ENST00000543886 MFSD4BQ5TF39 518 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 Q6ZNX1 250 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 DGAT2L6Q6ZPD8 337 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 SLCO6A1Q86UG4 719 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 KIF18BQ86Y91 864 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 NKAIN4Q8IVV8 208 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 ZNF595Q8IYB9 648 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 WDR36Q8NI36 951 aaKnown RBP15.87■□□□□ 0.13
PTPRO-209ENST00000543886 RIT1Q92963 219 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 RBM18Q96H35 190 aaKnown RBP15.87■□□□□ 0.13
PTPRO-209ENST00000543886 ARMC7Q9H6L4 198 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 EGLN3Q9H6Z9 239 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 TBC1D17Q9HA65 648 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 PDE7BQ9NP56 450 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 KRCC1Q9NPI7 259 aaPredicted RBP15.87■□□□□ 0.13
PTPRO-209ENST00000543886 POLE3Q9NRF9 147 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 TBC1D23Q9NUY8 699 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 TAS2R16Q9NYV7 291 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 DNAH14Q0VDD8 3507 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 NPIPA5A0A0B4J1W7 369 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 GXYLT2A0PJZ3 443 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 NPIPA7E9PJI5 369 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 PEX12O00623 359 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 TLX2O43763 284 aaPredicted RBP15.87■□□□□ 0.13
PTPRO-209ENST00000543886 PRKYO43930 277 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 CTNSO60931 367 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 CDC123O75794 336 aaPredicted RBP15.87■□□□□ 0.13
PTPRO-209ENST00000543886 SOX30O94993 753 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 HSMCR30P0CW71 290 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 NPIPA8P0DM63 369 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 MAP3K8P41279 467 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 OMPP47874 163 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 SERPINB10P48595 397 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 CSNK1EP49674 416 aaKnown RBP15.87■□□□□ 0.13
PTPRO-209ENST00000543886 CLK1P49759 484 aaKnown RBP15.87■□□□□ 0.13
PTPRO-209ENST00000543886 MAT1AQ00266 395 aaKnown RBP15.87■□□□□ 0.13
PTPRO-209ENST00000543886 DGUOKQ16854 277 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 GARNL3Q5VVW2 1013 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 SLC27A4Q6P1M0 643 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 FAM26EQ8N5C1 309 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 PMM1Q92871 262 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 RPL3LQ92901 407 aaKnown RBP15.87■□□□□ 0.13
PTPRO-209ENST00000543886 BORCS5Q969J3 196 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 LGALS12Q96DT0 336 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 ZDHHC12Q96GR4 267 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 PRTFDC1Q9NRG1 225 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 FBXO34Q9NWN3 711 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 SLC7A7Q9UM01 511 aa15.87■□□□□ 0.13
PTPRO-209ENST00000543886 CEP192Q8TEP8 1941 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 A0A1W2PPC1 479 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 AIREO43918 545 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 BRINP1O60477 761 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 CBFA2T3O75081 653 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 NKX2-2O95096 273 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 NTN1O95631 604 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 ZNF91Q05481 1191 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 NR1D2Q14995 579 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 MED22Q15528 200 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 SNAPC1Q16533 368 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 ZNF829Q3KNS6 432 aaPredicted RBP15.86■□□□□ 0.13
PTPRO-209ENST00000543886 ARMCX4Q5H9R4 360 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 TCTE1Q5JU00 501 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 ACSM5Q6NUN0 579 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 OGFOD3Q6PK18 319 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 RASSF6Q6ZTQ3 369 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 MBOAT2Q6ZWT7 520 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 TMEM255BQ8WV15 326 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 MMABQ96EY8 250 aaPredicted RBP15.86■□□□□ 0.13
PTPRO-209ENST00000543886 ZNF285Q96NJ3 590 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 TSSK6Q9BXA6 273 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms