RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 GLYATQ6IB77 296 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 IL20RBQ6UXL0 311 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 LINC00696Q6ZRV3 163 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 CYP4Z2PQ8N1L4 340 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 BEST3Q8N1M1 668 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 OR5M3Q8NGP4 307 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 RASSF5Q8WWW0 418 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 TM9SF4Q92544 642 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 PMM1Q92871 262 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 ASB9Q96DX5 294 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 NSMCE2Q96MF7 247 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 LMF1Q96S06 567 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 ADOQ96SZ5 270 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 ARHGAP9Q9BRR9 750 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 UTP23Q9BRU9 249 aaKnown RBP10.96□□□□□ -0.65
DDB1-223ENST00000543658 HOXD1Q9GZZ0 328 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 ARMC7Q9H6L4 198 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 ZBTB20Q9HC78 741 aaPredicted RBP10.96□□□□□ -0.65
DDB1-223ENST00000543658 ADPRHL2Q9NX46 363 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 SEC14L3Q9UDX4 400 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 CD300AQ9UGN4 299 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 SLC13A4Q9UKG4 626 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 MKLN1Q9UL63 735 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 USP22Q9UPT9 525 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 PCDHGA10Q9Y5H3 936 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 TNRC6AQ8NDV7 1962 aaKnown RBP10.96□□□□□ -0.66
DDB1-223ENST00000543658 TMEM200CA6NKL6 621 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 H3BNH8 94 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 MKRN2OSH3BPM6 223 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 CDK2AP1O14519 115 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 ARPC2O15144 300 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 KIAA0513O60268 411 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 TSPAN2O60636 221 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 PGM3O95394 542 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 UTS2O95399 124 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 DBIP07108 87 aaKnown RBP10.95□□□□□ -0.66
DDB1-223ENST00000543658 FBXO45P0C2W1 286 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 CYP4B1P13584 511 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 ETS2P15036 469 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 NCK1P16333 377 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 IL7RP16871 459 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 DCTP40126 519 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 CYB561P49447 251 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 ATP12AP54707 1039 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 POLE2P56282 527 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 ARG2P78540 354 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 CHRNEQ04844 493 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 MFAP5Q13361 173 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 FLOT2Q14254 428 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 TRIM25Q14258 630 aaKnown RBP10.95□□□□□ -0.66
DDB1-223ENST00000543658 LARS2Q15031 903 aaKnown RBP10.95□□□□□ -0.66
DDB1-223ENST00000543658 ADRM1Q16186 407 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 LIN52Q52LA3 116 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 C1orf146Q5VVC0 180 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 TYW3Q6IPR3 259 aaKnown RBP10.95□□□□□ -0.66
DDB1-223ENST00000543658 FRRS1Q6ZNA5 592 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 RTL4Q6ZR62 310 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 NUP54Q7Z3B4 507 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 DHFR2Q86XF0 187 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 ARMC10Q8N2F6 343 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 KDF1Q8NAX2 398 aaPredicted RBP10.95□□□□□ -0.66
DDB1-223ENST00000543658 FDCSPQ8NFU4 85 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 FAM110BQ8TC76 370 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 WDR60Q8WVS4 1066 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 LZICQ8WZA0 190 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 RNF145Q96MT1 663 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 TREX2Q9BQ50 279 aaPredicted RBP10.95□□□□□ -0.66
DDB1-223ENST00000543658 TBL1XR1Q9BZK7 514 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 SLC38A1Q9H2H9 487 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 METTL7AQ9H8H3 244 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 MTHFD2LQ9H903 347 aaPredicted RBP10.95□□□□□ -0.66
DDB1-223ENST00000543658 BCL2L10Q9HD36 194 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 KLRF1Q9NZS2 232 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 GMPR2Q9P2T1 348 aaKnown RBP10.95□□□□□ -0.66
DDB1-223ENST00000543658 RPS6KA6Q9UK32 745 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 ZNF232Q9UNY5 417 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 IFT52Q9Y366 437 aa10.95□□□□□ -0.66
DDB1-223ENST00000543658 NPIPA5A0A0B4J1W7 369 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 NPIPA7E9PJI5 369 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 TAF4O00268 1085 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 ICOSLGO75144 302 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 UGT2B11O75310 529 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 OR6B1O95007 311 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 IGKV1D-16P01601 117 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 P04436 131 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 GUSBP08236 651 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 NPIPA8P0DM63 369 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 NQO1P15559 274 aaKnown RBP10.94□□□□□ -0.66
DDB1-223ENST00000543658 KDELR2P33947 212 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 MSX2P35548 267 aaPredicted RBP10.94□□□□□ -0.66
DDB1-223ENST00000543658 HLCSP50747 726 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 FBXW4P57775 412 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 KCNJ2P63252 427 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 TRAP1Q12931 704 aaKnown RBP10.94□□□□□ -0.66
DDB1-223ENST00000543658 NTRK2Q16620 822 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 GRAMD1BQ3KR37 738 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 EIPR1Q53HC9 387 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 MTX3Q5HYI7 312 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 ZNF311Q5JNZ3 666 aa10.94□□□□□ -0.66
DDB1-223ENST00000543658 OLIG3Q7RTU3 272 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms