RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PIK3R3Q92569 461 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 PPCDCQ96CD2 204 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 C16orf58Q96GQ5 468 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 TRIB1Q96RU8 372 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 DSN1Q9H410 356 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ZNF395Q9H8N7 513 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 Q9N2J8 555 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 JKAMPQ9P055 326 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 DVL2O14641 736 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SCAMP2O15127 329 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ITM2AO43736 263 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SCO2O43819 266 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 PEX11AO75192 247 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 IL18BPO95998 194 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 IL2RAP01589 272 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 DHRS4L1P0CG22 281 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ACP2P11117 423 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 LAMP1P11279 417 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ZNF708P17019 499 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 EFNA1P20827 205 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CHMP24386 653 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 DSCR4P56555 118 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 FOXF2Q12947 444 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SNTB1Q13884 538 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 TESK1Q15569 626 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 BCL2A1Q16548 175 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ARSKQ6UWY0 536 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 PLXDC2Q6UX71 529 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ZAR1Q86SH2 424 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 MARCH3Q86UD3 253 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 RIMKLAQ8IXN7 391 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SLC16A11Q8NCK7 471 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 NUP43Q8NFH3 380 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 OR7A2PQ8NGA2 310 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CEP70Q8NHQ1 597 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 PSMA8Q8TAA3 256 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 AGR3Q8TD06 166 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 DUSP19Q8WTR2 217 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 FAM120BQ96EK7 910 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ZBED6CLQ96FA7 236 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 PKNOX2Q96KN3 472 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 PPP3R2Q96LZ3 170 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 C20orf27Q9GZN8 174 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SSU72Q9NP77 194 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 EQTNQ9NQ60 294 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 FBXO34Q9NWN3 711 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 MED11Q9P086 117 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CLCF1Q9UBD9 225 aa11.87□□□□□ -0.51
TNFRSF1A-215ENST00000543359 FAM221AA4D161 298 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CLCA1A8K7I4 914 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CTIFO43310 598 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 EMC8O43402 210 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 LYPLA1O75608 230 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 RCBTB2O95199 551 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 UTS2O95399 124 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 POU3F2P20265 443 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CTSSP25774 331 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 GPC1P35052 558 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ASCL1P50553 236 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 AGFG1P52594 562 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 PRR5P85299 388 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SRYQ05066 204 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ZNHIT3Q15649 155 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 DUSP5Q16690 384 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 TMEM44Q2T9K0 475 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 GRAMD1BQ3KR37 738 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 KRT71Q3SY84 523 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 MFSD12Q6NUT3 480 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ENPP6Q6UWR7 440 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 LRIG3Q6UXM1 1119 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 R3HCC1LQ7Z5L2 792 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 NUDCD3Q8IVD9 361 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 KRTCAP2Q8N6L1 136 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CDRT4Q8N9R6 151 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 OR4K17Q8NGC6 315 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 GPR151Q8TDV0 419 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 RNASE6Q93091 150 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 COQ8BQ96D53 544 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 C1GALT1C1Q96EU7 318 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 RMND5BQ96G75 393 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SFXN2Q96NB2 322 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 C1orf50Q9BV19 199 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 PPP4R1LQ9P1A2 415 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 DKKL1Q9UK85 242 aa11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 RPH3AQ9Y2J0 694 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-215ENST00000543359 TMEM114B3SHH9 223 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 BIRC5O15392 142 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 HCRTR2O43614 444 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 KCNK2O95069 426 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 KCNH1O95259 989 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 TGM6O95932 706 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 NGFRP08138 427 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 OPRM1P35372 400 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 GCKP35557 465 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 PRKAG1P54619 331 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 DIO3P55073 304 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 C21orf58P58505 322 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 RCAN2Q14206 197 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 IL23RQ5VWK5 629 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms