RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 TLE1Q04724 770 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 CYLC2Q14093 348 aaPredicted RBP15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 ARHGAP11BQ3KRB8 267 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 COQ5Q5HYK3 327 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 RNFT1Q5M7Z0 435 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 ATAD3BQ5T9A4 648 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 ZAR1Q86SH2 424 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 DHDDSQ86SQ9 333 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 SNX32Q86XE0 403 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 SDF2Q99470 211 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 OSBPL11Q9BXB4 747 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 RAD21L1Q9H4I0 556 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 IL1RL2Q9HB29 575 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 KLRF1Q9NZS2 232 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 FLRT3Q9NZU0 649 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 BOKQ9UMX3 212 aaPredicted RBP15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 ABCG2Q9UNQ0 655 aa15.67■□□□□ 0.1
RABGGTA-203ENST00000543002 GLSO94925 669 aaPredicted RBP15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 NGFRP08138 427 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 ZNF24P17028 368 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 ATP6V1C1P21283 382 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 PPIBP23284 216 aaKnown RBP15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 EVI2BP34910 448 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 RFC3P40938 356 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 CRATP43155 626 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 ALDH6A1Q02252 535 aaKnown RBP15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 PLGLB1Q02325 96 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 STX5Q13190 355 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 NFYCQ13952 458 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 HYAL4Q2M3T9 481 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 GRAMD1BQ3KR37 738 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 C16orf62Q7Z3J2 963 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 PACS2Q86VP3 889 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 ANKS4BQ8N8V4 417 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 OR4C3Q8NH37 302 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 RP9Q8TA86 221 aaKnown RBP15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 NR4A3Q92570 626 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 TMEM41AQ96HV5 264 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 ZNF597Q96LX8 424 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 TTTY12Q9BZ98 90 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 GALNT9Q9HCQ5 603 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 ZFP64Q9NPA5 681 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 UBQLN4Q9NRR5 601 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 OLAHQ9NV23 265 aa15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.66■□□□□ 0.1
RABGGTA-203ENST00000543002 SMG1Q96Q15 3661 aaKnown RBP15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 LRRC3CA6NJW4 275 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 ACOT7O00154 380 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 STX11O75558 287 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 GUSBP08236 651 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 ETFAP13804 333 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 TBXA2RP21731 343 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 MST1P26927 711 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 MASP1P48740 699 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 CLK3P49761 638 aaKnown RBP15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 GAS1P54826 345 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 FUT5Q11128 374 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 FADDQ13158 208 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 RGNQ15493 299 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 MMEL1Q495T6 779 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 GKAP1Q5VSY0 366 aaPredicted RBP15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 FNDC7Q5VTL7 733 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 REP15Q6BDI9 236 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 ZNF605Q86T29 641 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 SLC22A16Q86VW1 577 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 TREML1Q86YW5 311 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 SIAH3Q8IW03 269 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 MIB2Q96AX9 1013 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 ROPN1LQ96C74 230 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 JSRP1Q96MG2 331 aaPredicted RBP15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 CGREF1Q99674 301 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 SLX1AQ9BQ83 275 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 ZNF350Q9GZX5 532 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 POLE3Q9NRF9 147 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 THUMPD1Q9NXG2 353 aaKnown RBP15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 LIPT1Q9Y234 373 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 WIF1Q9Y5W5 379 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 ZNF462Q96JM2 2506 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 NINQ8N4C6 2090 aa15.65■□□□□ 0.1
RABGGTA-203ENST00000543002 PRAMEF27A3QJZ7 478 aa15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 C2orf72A6NCS6 295 aa15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 EVPLLA8MZ36 301 aa15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 ALG1L2C9J202 215 aa15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 ADAM10O14672 748 aa15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 MRASO14807 208 aa15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 TFECO14948 347 aaPredicted RBP15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 DCTN3O75935 186 aa15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 OXSR1O95747 527 aaPredicted RBP15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 NPPAP01160 153 aa15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 BMP2P12643 396 aa15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 COX4I1P13073 169 aa15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 ELAVL4P26378 380 aaKnown RBP15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 TDGF1P3P51864 188 aa15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 DSTNP60981 165 aa15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 PPIAP62937 165 aaKnown RBP15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 TRMT5Q32P41 509 aaKnown RBP15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 FLYWCH1Q4VC44 716 aa15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 RUNDC3AQ59EK9 446 aa15.64■□□□□ 0.09
RABGGTA-203ENST00000543002 AP1ARQ63HQ0 302 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms