RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 NDUFAF5Q5TEU4 345 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 TBC1D3GQ6DHY5 549 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 TBC1D3CQ6IPX1 549 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 TBC1D3Q8IZP1 549 aaPredicted RBP14.37□□□□□ -0.11
CNOT9-208ENST00000542068 KXD1Q9BQD3 176 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 GON7Q9BXV9 100 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 SLC28A3Q9HAS3 691 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 SERGEFQ9UGK8 458 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 ARRDC5A6NEK1 342 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 EFCAB14O75071 495 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 CA3P07451 260 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 GABRA5P31644 462 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 ID2Q02363 134 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 ZSWIM7Q19AV6 140 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 C3orf38Q5JPI3 329 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 FAM92BQ6ZTR7 304 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 RASGRP3Q8IV61 690 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 CPOQ8IVL8 374 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 NRMQ8IXM6 262 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 OR2L2Q8NH16 312 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 ZCCHC10Q8TBK6 192 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 TMEM43Q9BTV4 400 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 RNF32Q9H0A6 362 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 MED28Q9H204 178 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 KLHL31Q9H511 634 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 WDR26Q9H7D7 661 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 SEMA4GQ9NTN9 838 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 NUDT15Q9NV35 164 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 SAGE1Q9NXZ1 904 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 A0A0B4J203 849 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 SPINT1O43278 529 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 UBXN7O94888 489 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 TRAPPC2P0DI81 140 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 TRAPPC2BP0DI82 140 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 DDX6P26196 483 aaKnown RBP eCLIP14.36□□□□□ -0.111e-6■■□□□ 12.6
CNOT9-208ENST00000542068 SHC1P29353 583 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 FAM46CQ5VWP2 391 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 LAMTOR1Q6IAA8 161 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 FAM109BQ6ICB4 259 aaPredicted RBP14.36□□□□□ -0.11
CNOT9-208ENST00000542068 OR4N5Q8IXE1 308 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 NEUROD4Q9HD90 331 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 ENAMQ9NRM1 1142 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 MRPL15Q9P015 296 aaKnown RBP14.36□□□□□ -0.11
CNOT9-208ENST00000542068 CA5BQ9Y2D0 317 aa14.36□□□□□ -0.11
CNOT9-208ENST00000542068 CISD3P0C7P0 127 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 BNC1Q01954 994 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 PCDH1Q08174 1060 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 RAB40BQ12829 278 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 GPR176Q14439 515 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 POU4F3Q15319 338 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 NUDT13Q86X67 352 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 FAM109AQ8N4B1 249 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 ZNF614Q8N883 585 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 OR10H4Q8NGA5 316 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 OR4Q3Q8NH05 313 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 AKAP1Q92667 903 aaKnown RBP eCLIP14.35□□□□□ -0.11
CNOT9-208ENST00000542068 LRIG1Q96JA1 1093 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 MCOLN1Q9GZU1 580 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 OR51V1Q9H2C8 321 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 MGAT4AQ9UM21 535 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 A0A1W2PRQ8 180 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 SNTNA6NMZ2 147 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 CD3GP09693 182 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 HLA-DMAP28067 261 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 CDK3Q00526 305 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 CDK5Q00535 292 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 TPBGQ13641 420 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 PLBD1Q6P4A8 553 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 ESPNLQ6ZVH7 1005 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 C7orf61Q8IZ16 206 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 ZNF784Q8NCA9 323 aaPredicted RBP14.35□□□□□ -0.11
CNOT9-208ENST00000542068 MORN4Q8NDC4 146 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 OR4E2Q8NGC2 313 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 PIGKQ92643 395 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 C19orf43Q9BQ61 176 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 ARHGAP9Q9BRR9 750 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 MKRN2Q9H000 416 aaKnown RBP14.35□□□□□ -0.11
CNOT9-208ENST00000542068 NCKAP1Q9Y2A7 1128 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 A0A0A6YYJ9 748 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 KIAA0355O15063 1070 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 C1QBP02746 253 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 HLA-DPB1P04440 258 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 TRHRP34981 398 aaPredicted RBP14.35□□□□□ -0.11
CNOT9-208ENST00000542068 ACVR1BP36896 505 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 DUSP2Q05923 314 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 WDR45BQ5MNZ6 344 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 SIGIRRQ6IA17 410 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 TANGO2Q6ICL3 276 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 CCDC28AQ8IWP9 274 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 IZUMO1Q8IYV9 350 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 KLHL36Q8N4N3 616 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 OR10G6Q8NH81 332 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 ZNF431Q8TF32 576 aaPredicted RBP14.35□□□□□ -0.11
CNOT9-208ENST00000542068 ZNF514Q96K75 400 aaPredicted RBP14.35□□□□□ -0.11
CNOT9-208ENST00000542068 SAMD8Q96LT4 415 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 SPEF1Q9Y4P9 236 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 TCF20Q9UGU0 1960 aaKnown RBP14.35□□□□□ -0.11
CNOT9-208ENST00000542068 HEATR5BQ9P2D3 2071 aa14.35□□□□□ -0.11
CNOT9-208ENST00000542068 CIB4A0PJX0 185 aa14.34□□□□□ -0.11
CNOT9-208ENST00000542068 ZNF860A6NHJ4 632 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms