RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ZNF486Q96H40 463 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-217ENST00000541578 ELMO2Q96JJ3 720 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 SENP8Q96LD8 212 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 VSTM2LQ96N03 204 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 DUX3Q96PT4 197 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 PAIP2Q9BPZ3 127 aaKnown RBP3.63□□□□□ -1.83
SNHG1-217ENST00000541578 JPH2Q9BR39 696 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-217ENST00000541578 ALG12Q9BV10 488 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 RAB11FIP5Q9BXF6 653 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 ATP13A3Q9H7F0 1226 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 GORASP2Q9H8Y8 452 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 NMUR1Q9HB89 426 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 SLC25A19Q9HC21 320 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.63□□□□□ -1.83
SNHG1-217ENST00000541578 C1orf123Q9NWV4 160 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 KLHL8Q9P2G9 620 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-217ENST00000541578 BAIAP2L1Q9UHR4 511 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 FZR1Q9UM11 496 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 PPP1R3CQ9UQK1 317 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 OR10H1Q9Y4A9 318 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 AK9Q5TCS8 1911 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 UNC80Q8N2C7 3258 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 ECM29Q5VYK3 1845 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 CEMIPQ8WUJ3 1361 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 ZNF609O15014 1411 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 COL4A5P29400 1685 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 MYO9BQ13459 2157 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 GSAPA4D1B5 854 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 OR5H15A6NDH6 313 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 PCP4L1A6NKN8 68 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 CCDC169A6NNP5 214 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 BLOC1S5-TXNDC5H3BN57 136 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 EI24O14681 340 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 JAK2O60674 1132 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 DUSP11O75319 330 aaKnown RBP3.62□□□□□ -1.83
SNHG1-217ENST00000541578 AP2A2O94973 939 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 NDUFA7O95182 113 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 ANGPTL1O95841 491 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 MBD3O95983 291 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 NEFHP12036 1026 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 DRD5P21918 477 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 PBLDP30039 288 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-217ENST00000541578 ID1P41134 155 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 CRIP2P52943 208 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-217ENST00000541578 HILS1P60008 231 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 GSTO1P78417 241 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 IL9RQ01113 521 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 HAGHQ16775 308 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 HKDC1Q2TB90 917 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 CCDC183Q5T5S1 534 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 WLSQ5T9L3 541 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 SCYL2Q6P3W7 929 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 FIP1L1Q6UN15 594 aaKnown RBP3.62□□□□□ -1.83
SNHG1-217ENST00000541578 EFCAB13Q8IY85 973 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 KLHDC9Q8NEP7 349 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 OR2T34Q8NGX1 318 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 OR6F1Q8NGZ6 308 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 ATP8B4Q8TF62 1192 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 ITFG2Q969R8 447 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 TADA1Q96BN2 335 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 ACCSQ96QU6 501 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 ZSCAN5AQ9BUG6 496 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 PINK1Q9BXM7 581 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 CAPS2Q9BXY5 557 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 HOXD1Q9GZZ0 328 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 DEFB129Q9H1M3 183 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 VCX2Q9H322 139 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 PLEKHA3Q9HB20 300 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 LPAR2Q9HBW0 351 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 B3GAT2Q9NPZ5 323 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 TRPV5Q9NQA5 729 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 RNF14Q9UBS8 474 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 IKZF3Q9UKT9 509 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 GAB2Q9UQC2 676 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 ZMYM6O95789 1325 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 MGAMO43451 1857 aa3.62□□□□□ -1.83
SNHG1-217ENST00000541578 LAMB2P55268 1798 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 A0A087WW49 117 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 TTC26A0AVF1 554 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 ANHXE9PGG2 379 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 E9PMD0 336 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 SLCO1B7G3V0H7 640 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 SGK494L7N484 410 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 CLDN5O00501 218 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 NUDT21O43809 227 aaKnown RBP3.61□□□□□ -1.83
SNHG1-217ENST00000541578 UFL1O94874 794 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 NXPH2O95156 264 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 CCL5P13501 91 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 CALB2P22676 271 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 CHRNB4P30926 498 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 TIMP3P35625 211 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 HTR5AP47898 357 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 SLC7A2P52569 658 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 RAG2P55895 527 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 RPL27P61353 136 aaKnown RBP3.61□□□□□ -1.83
SNHG1-217ENST00000541578 CBX1P83916 185 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 FUT7Q11130 342 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 DCAF4L1Q3SXM0 396 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 ACSF3Q4G176 576 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-217ENST00000541578 ASPHD2Q6ICH7 369 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms