RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 RAB18Q9NP72 206 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 CD320Q9NPF0 282 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 PNO1Q9NRX1 252 aaKnown RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 C20orf96Q9NUD7 363 aaPredicted RBP5.05□□□□□ -1.6
DDB1-219ENST00000541513 MTCH1Q9NZJ7 389 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 LHX3Q9UBR4 397 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 EPHA6Q9UF33 1036 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 SLC7A8Q9UHI5 535 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 VANGL2Q9ULK5 521 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 RPH3ALQ9UNE2 315 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 RNF24Q9Y225 148 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 RASD1Q9Y272 281 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 TMED7Q9Y3B3 224 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 NPTNQ9Y639 398 aa5.05□□□□□ -1.6
DDB1-219ENST00000541513 TRAV18A0A075B6X5 111 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 TRBV11-1A0A0K0K1C0 115 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 LOC105371267A0A1B0GV96 52 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 OR2M5A3KFT3 312 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 LRRC3CA6NJW4 275 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 PP2D1A8MPX8 630 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 VWC2LB2RUY7 222 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 POC1B-GALNT4F8VUJ3 575 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 TRAPPC3O43617 180 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 NOBOXO60393 691 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 SNX3O60493 162 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 RBBP9O75884 186 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 H6PDO95479 791 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 EPOP01588 193 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 PNMA6AP0CW24 399 aaPredicted RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 FGF5P12034 268 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 ENO3P13929 434 aaPredicted RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 CR2P20023 1033 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 ZNF10P21506 573 aaPredicted RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 MARK3P27448 753 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 LAP3P28838 519 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 YWHABP31946 246 aaKnown RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 GCKP35557 465 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 RPS19P39019 145 aaKnown RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 NR0B1P51843 470 aaKnown RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 GEMP55040 296 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 RAB14P61106 215 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 EEF1A1P68104 462 aaKnown RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 CSNK1G2P78368 415 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 SRSF3P84103 164 aaKnown RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 PAX5Q02548 391 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 DLX2Q07687 328 aaPredicted RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 CTTNQ14247 550 aaKnown RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 SYPL1Q16563 259 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 CAMK4Q16566 473 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 LRRC26Q2I0M4 334 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 EEF1A1P5Q5VTE0 462 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 C11orf63Q6NUN7 778 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 VWA1Q6PCB0 445 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 VSTM1Q6UX27 236 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 WASH2PQ6VEQ5 465 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 ZNF852Q6ZMS4 543 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 NDUFAF7Q7L592 441 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 CPEB2Q7Z5Q1 589 aaKnown RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 CATSPER3Q86XQ3 398 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 RBFAQ8N0V3 343 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 TMEM99Q8N816 258 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 ZNF548Q8NEK5 533 aaPredicted RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 SPATA22Q8NHS9 363 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 MZB1Q8WU39 189 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 NRGNQ92686 78 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 MTERF3Q96E29 417 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 MRPL53Q96EL3 112 aaKnown RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 PARD6BQ9BYG5 372 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 ALOXE3Q9BYJ1 711 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 PRRG4Q9BZD6 226 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 MTIF3Q9H2K0 278 aaKnown RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 GAL3ST2Q9H3Q3 398 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 ELOVL6Q9H5J4 265 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 FAM124BQ9H5Z6 455 aaPredicted RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 NARFLQ9H6Q4 476 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 MTHFD2LQ9H903 347 aaPredicted RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 PARVBQ9HBI1 364 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 MRPL47Q9HD33 250 aaKnown RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 LYRM4Q9HD34 91 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 SLC2A4RGQ9NR83 387 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 SMPD4Q9NXE4 827 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 ASIC5Q9NY37 505 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 EURLQ9NYK6 297 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 TAS2R7Q9NYW3 318 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 NPAP1Q9NZP6 1156 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 ADAM22Q9P0K1 906 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 WRAP73Q9P2S5 460 aaPredicted RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 CYTH4Q9UIA0 394 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 ZNF346Q9UL40 294 aaKnown RBP5.04□□□□□ -1.6
DDB1-219ENST00000541513 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.04□□□□□ -1.6
DDB1-219ENST00000541513 NOX1Q9Y5S8 564 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 TRIOBPQ9H2D6 2365 aa5.04□□□□□ -1.6
DDB1-219ENST00000541513 TTC3P53804 2025 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 IGKV6-21A0A0C4DH24 114 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 SMIM35A0A1B0GVV1 85 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 LOC390937A0A1W2PQ73 354 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 FRG2CA6NGY1 282 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 WASHC1A8K0Z3 465 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 HHLA1C9JL84 531 aa5.03□□□□□ -1.6
DDB1-219ENST00000541513 HSPB6O14558 160 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms