RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 TBL1XR1Q9BZK7 514 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 NMUR2Q9GZQ4 415 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 CALML5Q9NZT1 146 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 A0A1W2PQD3 144 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 GXYLT2A0PJZ3 443 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 H3BNH8 94 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 CLIC1O00299 241 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 FADS1O60427 444 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 DCTN3O75935 186 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 PPIAP62937 165 aaKnown RBP17.19■□□□□ 0.34
VPS33A-205ENST00000541169 C17orf67Q0P5P2 114 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 FOXO1Q12778 655 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 CYLC2Q14093 348 aaPredicted RBP17.19■□□□□ 0.34
VPS33A-205ENST00000541169 MMEL1Q495T6 779 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 MTERF4Q7Z6M4 381 aaKnown RBP17.19■□□□□ 0.34
VPS33A-205ENST00000541169 FAM109AQ8N4B1 249 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 METTL25Q8N6Q8 603 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 ST6GALNAC3Q8NDV1 305 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 OR1J4Q8NGS1 313 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 FBXO30Q8TB52 745 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 XAGE5Q8WWM1 108 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 TRNT1Q96Q11 434 aaKnown RBP17.19■□□□□ 0.34
VPS33A-205ENST00000541169 NODALQ96S42 347 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 SDF2Q99470 211 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 SH3GL1Q99961 368 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 PROK2Q9HC23 129 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 WIF1Q9Y5W5 379 aa17.19■□□□□ 0.34
VPS33A-205ENST00000541169 ALG1L2C9J202 215 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 SCDO00767 359 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 CBR3O75828 277 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 RFX3P48380 749 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 DNASE1L1P49184 302 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 RPS26P62854 115 aaKnown RBP17.18■□□□□ 0.34
VPS33A-205ENST00000541169 FOXK1P85037 733 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 RBPJQ06330 500 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 ELOAQ14241 798 aaKnown RBP17.18■□□□□ 0.34
VPS33A-205ENST00000541169 TIGD3Q6B0B8 471 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 DNAJC14Q6Y2X3 702 aaPredicted RBP17.18■□□□□ 0.34
VPS33A-205ENST00000541169 OR5D16Q8NGK9 328 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 CMTM5Q96DZ9 223 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 GPR137Q96N19 417 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 CCT8L2Q96SF2 557 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 ZDHHC11Q9H8X9 412 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 GID8Q9NWU2 228 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 TUBA8Q9NY65 449 aaPredicted RBP17.18■□□□□ 0.34
VPS33A-205ENST00000541169 P2RX2Q9UBL9 471 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 NTNG1Q9Y2I2 539 aa17.18■□□□□ 0.34
VPS33A-205ENST00000541169 HMGN4O00479 90 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 SNPHO15079 494 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 OR12D1P0DN82 309 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 HOXB9P17482 250 aaPredicted RBP17.17■□□□□ 0.34
VPS33A-205ENST00000541169 MSX1P28360 303 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 CRATP43155 626 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 ATP12AP54707 1039 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 NFYCQ13952 458 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 UBAP2LQ14157 1087 aaKnown RBP17.17■□□□□ 0.34
VPS33A-205ENST00000541169 SLC10A1Q14973 349 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 RGNQ15493 299 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 FLYWCH1Q4VC44 716 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 PAGE3Q5JUK9 113 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 TNFAIP8L2Q6P589 184 aaPredicted RBP17.17■□□□□ 0.34
VPS33A-205ENST00000541169 FIGNL1Q6PIW4 674 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 DLEU7Q6UYE1 221 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 MTDHQ86UE4 582 aaKnown RBP17.17■□□□□ 0.34
VPS33A-205ENST00000541169 SIAH3Q8IW03 269 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 CLEC4FQ8N1N0 589 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 GHDCQ8N2G8 530 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 ROPN1LQ96C74 230 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 ZNF350Q9GZX5 532 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 SAP130Q9H0E3 1048 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 SERHL2Q9H4I8 314 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 PTGES2Q9H7Z7 377 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 ACKR4Q9NPB9 350 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 SEC14L3Q9UDX4 400 aa17.17■□□□□ 0.34
VPS33A-205ENST00000541169 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.17■□□□□ 0.34
VPS33A-205ENST00000541169 MRPS18CQ9Y3D5 142 aaKnown RBP17.17■□□□□ 0.34
VPS33A-205ENST00000541169 TRBV5-3A0A0A0MS03 114 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 NDUFB5O43674 189 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 SUSD5O60279 629 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 HCN1O60741 890 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 IGKV1D-16P01601 117 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 BMP2P12643 396 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 GPX2P18283 190 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 PRDX6P30041 224 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 GCKP35557 465 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 PTGDSP41222 190 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 DSTNP60981 165 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 SF3A3Q12874 501 aaKnown RBP eCLIP17.16■□□□□ 0.34
VPS33A-205ENST00000541169 GANABQ14697 944 aaKnown RBP17.16■□□□□ 0.34
VPS33A-205ENST00000541169 TRMT5Q32P41 509 aaKnown RBP17.16■□□□□ 0.34
VPS33A-205ENST00000541169 GRAMD1BQ3KR37 738 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 PRR30Q53SZ7 412 aaPredicted RBP17.16■□□□□ 0.34
VPS33A-205ENST00000541169 PRAMEF8Q5VWM4 474 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 PRAMEF7Q5VXH5 474 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 DHDDSQ86SQ9 333 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 PLCZ1Q86YW0 608 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 JSRP1Q96MG2 331 aaPredicted RBP17.16■□□□□ 0.34
VPS33A-205ENST00000541169 LRRC37BQ96QE4 947 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 ZNF703Q9H7S9 590 aaPredicted RBP17.16■□□□□ 0.34
VPS33A-205ENST00000541169 MTHFD2LQ9H903 347 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms