RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PGBD2Q6P3X8 592 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 LANCL3Q6ZV70 420 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 MED25Q71SY5 747 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 MORN4Q8NDC4 146 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 DIO2Q92813 273 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 NAT6Q93015 286 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 PMEPA1Q969W9 287 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 TMIGD2Q96BF3 282 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 SENP5Q96HI0 755 aaPredicted RBP11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 PRRC1Q96M27 445 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 OR1F2PQ96R84 312 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 CTRCQ99895 268 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 VN1R1Q9GZP7 353 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 SLC9A8Q9Y2E8 581 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 SH3PXD2BA1X283 911 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 NTN3O00634 580 aaPredicted RBP11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 CNOT3O75175 753 aaKnown RBP11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 STX11O75558 287 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 CLPTM1O96005 669 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 TP53P04637 393 aaPredicted RBP11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 GKN3PP0CG01 181 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 TNNI3P19429 210 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 MAPK10P53779 464 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 CDK5R2Q13319 367 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 SMN1Q16637 294 aaKnown RBP11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 NADK2Q4G0N4 442 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 MRPL2Q5T653 305 aaKnown RBP11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 PHF19Q5T6S3 580 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 TMEM236Q5W0B7 351 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 FAAH2Q6GMR7 532 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 RHBDD2Q6NTF9 364 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 QSOX2Q6ZRP7 698 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 TAGAPQ8N103 731 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 GFM1Q96RP9 751 aaKnown RBP11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 RHNO1Q9BSD3 238 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 AKIRIN1Q9H9L7 192 aaPredicted RBP11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 FAM86C1Q9NVL1 165 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 PAK1IP1Q9NWT1 392 aaPredicted RBP11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 FLRT3Q9NZU0 649 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 REV1Q9UBZ9 1251 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 MMACHCQ9Y4U1 282 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 PCDHGA6Q9Y5G7 932 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 GMPPBQ9Y5P6 360 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 COL5A1P20908 1838 aaPredicted RBP11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 TCRBV16S1A1N1A0A5B0 115 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 LNP1A1A4G5 178 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 TRIM64CA6NLI5 447 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 D6RAR5 112 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 ADAM11O75078 769 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 UGT2B11O75310 529 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 SYPP08247 313 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 ANXA8P13928 327 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 HTR2AP28223 471 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 FMO3P31513 532 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 TPD52P55327 224 aaPredicted RBP11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 SLC37A1P57057 533 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 RGS8P57771 180 aaPredicted RBP11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 IL5RAQ01344 420 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 ACY1Q03154 408 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 SERTAD2Q14140 314 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 ENTPD8Q5MY95 495 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 C6orf141Q5SZD1 244 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 DCST1Q5T197 706 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 ZNF385CQ66K41 422 aaPredicted RBP11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 DESI1Q6ICB0 168 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 RABEPKQ7Z6M1 372 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 ZER1Q7Z7L7 766 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 PEX5LQ8IYB4 626 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 ZNF721Q8TF20 911 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 APH1BQ8WW43 257 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 FNDC11Q9BVV2 318 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 NUDT9Q9BW91 350 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 ING2Q9H160 280 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 FANCEQ9HB96 536 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 RXFP3Q9NSD7 469 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 CDC14AQ9UNH5 594 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 POFUT2Q9Y2G5 429 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 KIF26BQ2KJY2 2108 aa11.36□□□□□ -0.59
AP003559.1-201ENST00000540906 A0A087WUU8 490 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 IGHV3-20A0A0C4DH32 117 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 A0A1W2PRQ8 180 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 FAAHO00519 579 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 XPNPEP2O43895 674 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 OR10H3O60404 316 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 PRAMEF2O60811 474 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 SCRG1O75711 98 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 LYPD3O95274 346 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 SOX14O95416 240 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 IGKV3-11P04433 115 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 HTR1AP08908 422 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 ZNF28P17035 718 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 CRHBPP24387 322 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 RYKP34925 604 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 CLDN6P56747 220 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 DGCR6Q14129 220 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 KEAP1Q14145 624 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 FLYWCH1Q4VC44 716 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 LIN52Q52LA3 116 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 PLA2G2CQ5R387 149 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 PDZK1Q5T2W1 519 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms