RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 HYKKA2RU49 373 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 GALR3O60755 368 aaPredicted RBP16.71■□□□□ 0.27
GNE-204ENST00000539208 MED26O95402 600 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 CD97P48960 835 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 ZNF136P52737 540 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 HOXC5Q00444 222 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 MEX3DQ86XN8 651 aaKnown RBP16.71■□□□□ 0.27
GNE-204ENST00000539208 CACTIN-AS1Q8N1I8 211 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 ZNF619Q8N2I2 560 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 PARP16Q8N5Y8 322 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 CLDN22Q8N7P3 220 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 ANKK1Q8NFD2 765 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 HMGB4Q8WW32 186 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 CNPPD1Q9BV87 410 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 ASPNQ9BXN1 380 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 TEX12Q9BXU0 123 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 SP140LQ9H930 580 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 QPCTLQ9NXS2 382 aa16.71■□□□□ 0.27
GNE-204ENST00000539208 CRNNQ9UBG3 495 aaPredicted RBP16.71■□□□□ 0.27
GNE-204ENST00000539208 ZNF670-ZNF695F2Z2N8 137 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 FGF17O60258 216 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 STX11O75558 287 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 EIF2S1P05198 315 aaKnown RBP16.7■□□□□ 0.26
GNE-204ENST00000539208 DBIP07108 87 aaKnown RBP16.7■□□□□ 0.26
GNE-204ENST00000539208 PVRP15151 417 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 CPEP16870 476 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 MYL12AP19105 171 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 MAP3K8P41279 467 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 MTNR1AP48039 350 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 BNC1Q01954 994 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 MLLT1Q03111 559 aaPredicted RBP16.7■□□□□ 0.26
GNE-204ENST00000539208 CDC20Q12834 499 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 EIF2B5Q13144 721 aaKnown RBP16.7■□□□□ 0.26
GNE-204ENST00000539208 KIAA0895LQ68EN5 471 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 PAQR6Q6TCH4 344 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 POGLUT1Q8NBL1 392 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 SLC37A2Q8TED4 501 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 RNFT2Q96EX2 444 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 NUAK2Q9H093 628 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 KRCC1Q9NPI7 259 aaPredicted RBP16.7■□□□□ 0.26
GNE-204ENST00000539208 GPR27Q9NS67 375 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 KLHL3Q9UH77 587 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 DOLKQ9UPQ8 538 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 NTNG1Q9Y2I2 539 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 MYO9BQ13459 2157 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 SPTY2D1-AS1A0A0U1RR47 76 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 ZNF860A6NHJ4 632 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 SHISA7A6NL88 538 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 SNX4O95219 450 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 AK1P00568 194 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 WNT4P56705 351 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 MAP4K2Q12851 820 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 PRICKLE4Q2TBC4 344 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 DCST2Q5T1A1 773 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 PRSS41Q7RTY9 318 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 CCDC190Q86UF4 302 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 RANBP3LQ86VV4 465 aaPredicted RBP16.7■□□□□ 0.26
GNE-204ENST00000539208 NRMQ8IXM6 262 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 RBM12BQ8IXT5 1001 aaKnown RBP16.7■□□□□ 0.26
GNE-204ENST00000539208 CA13Q8N1Q1 262 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 CSNK1A1LQ8N752 337 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 TCEAL2Q9H3H9 227 aaPredicted RBP16.7■□□□□ 0.26
GNE-204ENST00000539208 CHCHD3Q9NX63 227 aaKnown RBP16.7■□□□□ 0.26
GNE-204ENST00000539208 SSR3Q9UNL2 185 aa16.7■□□□□ 0.26
GNE-204ENST00000539208 EXOSC1Q9Y3B2 195 aaKnown RBP16.7■□□□□ 0.26
GNE-204ENST00000539208 STK25O00506 426 aa16.69■□□□□ 0.26
GNE-204ENST00000539208 LDB3O75112 727 aa16.69■□□□□ 0.26
GNE-204ENST00000539208 RPS19P39019 145 aaKnown RBP16.69■□□□□ 0.26
GNE-204ENST00000539208 MGAT2Q10469 447 aa16.69■□□□□ 0.26
GNE-204ENST00000539208 DNASE1L3Q13609 305 aa16.69■□□□□ 0.26
GNE-204ENST00000539208 AGAP7PQ5VUJ5 663 aa16.69■□□□□ 0.26
GNE-204ENST00000539208 ZNF620Q6ZNG0 422 aa16.69■□□□□ 0.26
GNE-204ENST00000539208 SLC22A16Q86VW1 577 aa16.69■□□□□ 0.26
GNE-204ENST00000539208 TMEFF1Q8IYR6 380 aa16.69■□□□□ 0.26
GNE-204ENST00000539208 TMEM52Q8NDY8 209 aa16.69■□□□□ 0.26
GNE-204ENST00000539208 TMEM255BQ8WV15 326 aa16.69■□□□□ 0.26
GNE-204ENST00000539208 RFKQ969G6 155 aa16.69■□□□□ 0.26
GNE-204ENST00000539208 EXOSC4Q9NPD3 245 aaKnown RBP16.69■□□□□ 0.26
GNE-204ENST00000539208 SURF4O15260 269 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 NTN1O95631 604 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 NID1P14543 1247 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 GNSP15586 552 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 ID2Q02363 134 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 GPR68Q15743 365 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 AADACL4Q5VUY2 407 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 CTHRC1Q96CG8 243 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 ADAP2Q9NPF8 381 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 POLE3Q9NRF9 147 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 ABCB10Q9NRK6 738 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 MAT2BQ9NZL9 334 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 SLC7A7Q9UM01 511 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 GPR52Q9Y2T5 361 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 CDH10Q9Y6N8 788 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 ARHGEF17Q96PE2 2063 aaPredicted RBP16.68■□□□□ 0.26
GNE-204ENST00000539208 TRAPPC13A5PLN9 417 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 OR5K3A6NET4 321 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 LOC110117498-PIK3R3F6TDL0 507 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 BOLA2-SMG1P6H3BVE0 249 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 FMO6PO60774 539 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 SOX30O94993 753 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms