RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 C1orf220Q5T0J3 134 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CLEC2AQ6UVW9 174 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 TRPT1Q86TN4 253 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF679Q8IYX0 411 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 C19orf60Q96EN9 201 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 PCED1BQ96HM7 432 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 INPP4AQ96PE3 977 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 TCHPQ9BT92 498 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 DPH7Q9BTV6 452 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 KRTAP4-3Q9BYR4 195 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 NACA2Q9H009 215 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 EHD1Q9H4M9 534 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 IMPAD1Q9NX62 359 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 POMT2Q9UKY4 750 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 TRAF3IP3Q9Y228 551 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 JCADQ9P266 1359 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 KMT2AQ03164 3969 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 BRCA1P38398 1863 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 KIF27Q86VH2 1401 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 YTHDC2Q9H6S0 1430 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 HUWE1Q7Z6Z7 4374 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 BRWD3Q6RI45 1802 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 IGHV3OR16-12A0A075B7B8 117 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 XKRY2A2RUG3 117 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CCDC162PA2VCL2 907 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF724A8MTY0 619 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 PRR23D1E9PI22 279 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 K7ENP7 123 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 NDUFS8O00217 210 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 BCL2L11O43521 198 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 JAK2O60674 1132 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 SMC2O95347 1197 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 PROS1P07225 676 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CRYGBP07316 175 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 RETP07949 1114 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 PRR23D2P0DMB1 279 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 GNB3P16520 340 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 OPRL1P41146 370 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 TNFSF9P41273 254 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 XGP55808 180 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 DLX5P56178 289 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 RPS27AP62979 156 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 MRPS21P82921 87 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CNTN1Q12860 1018 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 LY6DQ14210 128 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 C16orf72Q14CZ0 275 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CCL14Q16627 93 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 C17orf58Q2M2W7 97 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 BEX5Q5H9J7 111 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CAPN13Q6MZZ7 669 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 RBMS3Q6XE24 437 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF600Q6ZNG1 722 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CHMP1BQ7LBR1 199 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 KLHDC8BQ8IXV7 354 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 LINC00469Q8N7U9 141 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 DMBX1Q8NFW5 382 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 OR52B4Q8NGK2 314 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 OR1B1Q8NGR6 318 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 OR2T3Q8NH03 318 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 NPRL2Q8WTW4 380 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 SMAP2Q8WU79 429 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF501Q96CX3 271 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 MOCOSQ96EN8 888 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 NAF1Q96HR8 494 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 BCL7BQ9BQE9 202 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF670Q9BS34 389 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 URM1Q9BTM9 101 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 MCRIP2Q9BUT9 160 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 SLC29A3Q9BZD2 475 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 TSGA10Q9BZW7 698 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 RACGAP1Q9H0H5 632 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 DCLRE1BQ9H816 532 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 FN3KRPQ9HA64 309 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 FAM120CQ9NX05 1096 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 UTP6Q9NYH9 597 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 RDH8Q9NYR8 311 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 PIPOXQ9P0Z9 390 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ASIC3Q9UHC3 531 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CRLS1Q9UJA2 301 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 DIMT1Q9UNQ2 313 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 PLCL2Q9UPR0 1127 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 AQRO60306 1485 aaKnown RBP eCLIP0.86□□□□□ -2.273e-6■■□□□ 12.6
HIF1A-204ENST00000539097 CFAP43Q8NDM7 1665 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 RLFQ13129 1914 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 NCOA3Q9Y6Q9 1424 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 TDRD6O60522 2096 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 NCAPD3P42695 1498 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 TRAV9-2A0A087WT02 112 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 SAA2-SAA4A0A096LPE2 208 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF716A6NP11 495 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 A8MVM7 634 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 AK1P00568 194 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF735P0CB33 412 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 AMD1P17707 334 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 UGT1A4P22310 534 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 GIFP27352 417 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 PRDX3P30048 256 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CEACAM8P31997 349 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 IFNAR2P48551 515 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms