RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CDRT4Q8N9R6 151 aa13.12□□□□□ -0.31
ACTN1-205ENST00000538545 DHRS1Q96LJ7 313 aa13.12□□□□□ -0.31
ACTN1-205ENST00000538545 UCK2Q9BZX2 261 aa13.12□□□□□ -0.31
ACTN1-205ENST00000538545 ZNF350Q9GZX5 532 aa13.12□□□□□ -0.31
ACTN1-205ENST00000538545 DNAJC27Q9NZQ0 273 aa13.12□□□□□ -0.31
ACTN1-205ENST00000538545 NDUFA13Q9P0J0 144 aa13.12□□□□□ -0.31
ACTN1-205ENST00000538545 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.12□□□□□ -0.31
ACTN1-205ENST00000538545 CNTRLQ7Z7A1 2325 aa13.12□□□□□ -0.31
ACTN1-205ENST00000538545 PCNX3Q9H6A9 2034 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 AGAP5A6NIR3 686 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 SIGLEC6O43699 453 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 DUX1O43812 170 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 CYP7B1O75881 506 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 KCNK2O95069 426 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 CPNE6O95741 557 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 CCDC159P0C7I6 412 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 HTR2AP28223 471 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 TGFBR1P36897 503 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 GNA13Q14344 377 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 PROX2Q3B8N5 592 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 PDZK1Q5T2W1 519 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 GTF2IRD2BQ6EKJ0 949 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 PLEKHM3Q6ZWE6 761 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 GTF2IRD2Q86UP8 949 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 PEX5LQ8IYB4 626 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 RHOXF1Q8NHV9 184 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 FAR1Q8WVX9 515 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 DIO2Q92813 273 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 ARHGDIGQ99819 225 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 MTHFD2LQ9H903 347 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-205ENST00000538545 UCK1Q9HA47 277 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 FOLH1BQ9HBA9 442 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 SLC7A7Q9UM01 511 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 SNX5Q9Y5X3 404 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 A0A1W2PRQ8 180 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 CDC14CA4D256 554 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 H3BMQ9 156 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 CTNSO60931 367 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 APOL3O95236 402 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 STSP08842 583 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 GABRB1P18505 474 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 ZNF136P52737 540 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 UGT2B15P54855 530 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 HSD11B2P80365 405 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 DOC2BQ14184 412 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 PLK5Q496M5 336 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 B3GNT6Q6ZMB0 384 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 WDR88Q6ZMY6 472 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 KIF18BQ86Y91 864 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 OR13F1Q8NGS4 319 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 C16orf52Q8NHV5 167 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 ATOH1Q92858 354 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-205ENST00000538545 COG8Q96MW5 612 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 ZNF285Q96NJ3 590 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 DGAT2Q96PD7 388 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 NRSN2Q9GZP1 204 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 DUSP21Q9H596 190 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 BLOC1S6Q9UL45 172 aa13.11□□□□□ -0.31
ACTN1-205ENST00000538545 C17orf51A8MQB3 221 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 FAAHO00519 579 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 GNB5O14775 395 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 STX11O75558 287 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 TIAF1O95411 115 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 CH25HO95992 272 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 FAM69BQ5VUD6 431 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 ACSM5Q6NUN0 579 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 PTCHD4Q6ZW05 846 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 EID2Q8N6I1 236 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 GATSQ8NAP1 163 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 CNOT9Q92600 299 aaKnown RBP13.1□□□□□ -0.31
ACTN1-205ENST00000538545 GGHQ92820 318 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 GAREM1Q9H706 876 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 TVP23BQ9NYZ1 205 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 FLRT3Q9NZU0 649 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 GPR52Q9Y2T5 361 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 A0A087WV62 115 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 A0A1W2PQM1 296 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 ZAR1LA6NP61 321 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 LAMTOR5O43504 91 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 GMFGO60234 142 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 TRMUO75648 421 aaKnown RBP13.1□□□□□ -0.31
ACTN1-205ENST00000538545 PSMB9P28065 219 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 EPHA8P29322 1005 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-205ENST00000538545 MAP3K8P41279 467 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 EEF1A1P68104 462 aaKnown RBP13.1□□□□□ -0.31
ACTN1-205ENST00000538545 POU6F2P78424 691 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-205ENST00000538545 GRM7Q14831 915 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 FLYWCH1Q4VC44 716 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 BORAQ6PGQ7 559 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 ZNF730Q6ZMV8 503 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 GDF7Q7Z4P5 450 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 NRMQ8IXM6 262 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 ZNF619Q8N2I2 560 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 TCEANCQ8N8B7 351 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 SLC38A9Q8NBW4 561 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 ZNF675Q8TD23 568 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 GRHL3Q8TE85 626 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 ITPAQ9BY32 194 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 FGF21Q9NSA1 209 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 SCN3BQ9NY72 215 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms