RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 OTUB2Q96DC9 234 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 TRMT61BQ9BVS5 477 aaKnown RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 SYT4Q9H2B2 425 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 ZCCHC3Q9NUD5 404 aaKnown RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 TRBV5-3A0A0A0MS03 114 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 HOXA2O43364 376 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 GLULP15104 373 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 EPHB3P54753 998 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 CAP1Q01518 475 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF155Q12901 538 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 PUM1Q14671 1186 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 PABPC1L2AQ5JQF8 200 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 C18orf63Q68DL7 685 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 FAM122BQ7Z309 247 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 ZER1Q7Z7L7 766 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 FAM86B1Q8N7N1 296 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 FAM71CQ8NEG0 241 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 OR2T4Q8NH00 348 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 TEPSINQ96N21 525 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 GPER1Q99527 375 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 NIT2Q9NQR4 276 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 MYEF2Q9P2K5 600 aaKnown RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 KLHL42Q9P2K6 505 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 MUTYHQ9UIF7 546 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 CA5BQ9Y2D0 317 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 NRAPQ86VF7 1730 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 SDC3O75056 442 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 STBD1O95210 358 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 STATHP02808 62 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 RD3LP0DJH9 198 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 CD34P28906 385 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 MAP2K6P52564 334 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 WNT4P56705 351 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 KIAA1024LP59773 190 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 POLR2LP62875 67 aaKnown RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 JAG1P78504 1218 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 SORDQ00796 357 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 TARBP2Q15633 366 aaKnown RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 HBMQ6B0K9 141 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 CEP68Q76N32 757 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 GPR155Q7Z3F1 870 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 NPWQ8N729 165 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 DBF4BQ8NFT6 615 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 AIF1LQ9BQI0 150 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 NDOR1Q9UHB4 597 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF623O75123 536 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 SNRNP70P08621 437 aaKnown RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 RAB4AP20338 218 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 CERS1P27544 350 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 MAPK9P45984 424 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 LILRA4P59901 499 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 RPS13P62277 151 aaKnown RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 PYCR3Q53H96 274 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 CARD16Q5EG05 197 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 BEX5Q5H9J7 111 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 PM20D1Q6GTS8 502 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 GSG1LQ6UXU4 331 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 C17orf107Q6ZR85 190 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 SLC7A13Q8TCU3 470 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 PAQR8Q8TEZ7 354 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 UBTD2Q8WUN7 234 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 SORCS1Q8WY21 1168 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 SLC6A7Q99884 636 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 PRR14Q9BWN1 585 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 C14orf105Q9NVL8 296 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 RPS10-NUDT3A0A1W2PQS6 291 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 SNRPGP15A8MWD9 76 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 OR1F1O43749 312 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 UBL3O95164 117 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 IFNA17P01571 189 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 FGF2P09038 288 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 HSD3B1P14060 373 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 HSD3B2P26439 372 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 AQP2P41181 271 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 DLX5P56178 289 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 TAS2R50P59544 299 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF79Q15937 498 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 EIF5AL1Q6IS14 154 aaKnown RBP5.1□□□□□ -1.59
PTPRD-213ENST00000537002 PSAPL1Q6NUJ1 521 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 FAM111BQ6SJ93 734 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 SERPINA13PQ6UXR4 307 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 TMC8Q8IU68 726 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 ORAI1Q96D31 301 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 MED31Q9Y3C7 131 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 D6RAR5 112 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 LGALS8O00214 317 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 PRICKLE3O43900 615 aaPredicted RBP5.1□□□□□ -1.59
PTPRD-213ENST00000537002 TBX18O95935 607 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 PRPH2P23942 346 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 PYCR1P32322 319 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 PCGF2P35227 344 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 RPS19P39019 145 aaKnown RBP5.1□□□□□ -1.59
PTPRD-213ENST00000537002 YBEYP58557 167 aaPredicted RBP5.1□□□□□ -1.59
PTPRD-213ENST00000537002 DNLZQ5SXM8 178 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF425Q6IV72 752 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 REEP3Q6NUK4 255 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 LRRC56Q8IYG6 542 aaPredicted RBP5.1□□□□□ -1.59
PTPRD-213ENST00000537002 MFSD8Q8NHS3 518 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 ARL11Q969Q4 196 aa5.1□□□□□ -1.59
PTPRD-213ENST00000537002 FUBP1Q96AE4 644 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms