RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 IL33O95760 270 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 MYL2P10916 166 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 CD79BP40259 229 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 SUCLG1P53597 346 aaKnown RBP17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 PSMD4P55036 377 aaKnown RBP17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 CLDN15P56746 228 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 NKX6-1P78426 367 aaPredicted RBP17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 BTLAQ7Z6A9 289 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 BIVMQ86UB2 503 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 DUSP19Q8WTR2 217 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 FIG4Q92562 907 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 ELP4Q96EB1 424 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 AMDHD1Q96NU7 426 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 WFIKKN1Q96NZ8 548 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 PIGQQ9BRB3 760 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 PINK1Q9BXM7 581 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 ZNF226Q9NYT6 803 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 FLRT3Q9NZU0 649 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 TBK1Q9UHD2 729 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 HEATR5AQ86XA9 2040 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 G3V2L1 256 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 H3BML4 177 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 SEC14L5O43304 696 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 CTIFO43310 598 aaKnown RBP17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 RSL1D1O76021 490 aaKnown RBP17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 KIR2DL2P43627 348 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 RFX3P48380 749 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 SLC29A2Q14542 456 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 SHEQ5VZ18 495 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 ZYG11AQ6WRX3 759 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 IKBIPQ70UQ0 350 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 TRIM46Q7Z4K8 759 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 MARCH3Q86UD3 253 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 OR5M1Q8NGP8 315 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 ZNF845Q96IR2 970 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 C18orf12Q96KH6 178 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 SLC39A3Q9BRY0 314 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 LMF2Q9BU23 707 aaKnown RBP17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 RTN4RQ9BZR6 473 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 OPN3Q9H1Y3 402 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 L2HGDHQ9H9P8 463 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 C3orf14Q9HBI5 128 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 RRAGDQ9NQL2 400 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 KLHL28Q9NXS3 571 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 ELOVL5Q9NYP7 299 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 C6orf203Q9P0P8 240 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 EMCNQ9ULC0 261 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 ZNF175Q9Y473 711 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 JMJD1CQ15652 2540 aa17.74■□□□□ 0.43
TNFRSF1B-204ENST00000536782 OR2M5A3KFT3 312 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 H0YC42 278 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 EMC8O43402 210 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 GLRA3O75311 464 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 POU2F1P14859 743 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 KCNJ5P48544 419 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 TPD52P55327 224 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 RPS3AP61247 264 aaKnown RBP17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 SIRPAP78324 504 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 FGFBP1Q14512 234 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 GLYR1Q49A26 553 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 NOXRED1Q6NXP6 359 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 ZNF474Q6S9Z5 364 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 MZB1Q8WU39 189 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 C1GALT1C1Q96EU7 318 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 MED18Q9BUE0 208 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 TBL1XR1Q9BZK7 514 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 RNF122Q9H9V4 155 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 ROS1P08922 2347 aa17.73■□□□□ 0.43
TNFRSF1B-204ENST00000536782 TTC36A6NLP5 189 aa17.72■□□□□ 0.43
TNFRSF1B-204ENST00000536782 ARHGEF9O43307 516 aa17.72■□□□□ 0.43
TNFRSF1B-204ENST00000536782 UGT2B10P36537 528 aa17.72■□□□□ 0.43
TNFRSF1B-204ENST00000536782 CLDN20P56880 219 aa17.72■□□□□ 0.43
TNFRSF1B-204ENST00000536782 C17orf67Q0P5P2 114 aa17.72■□□□□ 0.43
TNFRSF1B-204ENST00000536782 PON3Q15166 354 aa17.72■□□□□ 0.43
TNFRSF1B-204ENST00000536782 CFAP157Q5JU67 520 aa17.72■□□□□ 0.43
TNFRSF1B-204ENST00000536782 FRMD7Q6ZUT3 714 aa17.72■□□□□ 0.43
TNFRSF1B-204ENST00000536782 CXorf67Q86X51 503 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1B-204ENST00000536782 KRTAP1-3Q8IUG1 177 aa17.72■□□□□ 0.43
TNFRSF1B-204ENST00000536782 FNDC9Q8TBE3 224 aa17.72■□□□□ 0.43
TNFRSF1B-204ENST00000536782 AP4B1Q9Y6B7 739 aa17.72■□□□□ 0.43
TNFRSF1B-204ENST00000536782 A0A1W2PPM1 405 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 DEFB108AA8MXU0 73 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 C16orf97H3BN30 126 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 SIAH2O43255 324 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 SEC22BO75396 215 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 KCNH1O95259 989 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 UTS2O95399 124 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 ANGPTL1O95841 491 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 CGAP01215 116 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 PROCP04070 461 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 INHBBP09529 407 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 IFI6P09912 130 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 FAM153BP0C7A2 387 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 CD8BP10966 210 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 CRYGSP22914 178 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 ADSLP30566 484 aaPredicted RBP17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 GABRA3P34903 492 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 OCRLQ01968 901 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 SGCBQ16585 318 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 FAM153CQ494X1 144 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms