RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 PAOXQ6QHF9 649 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 ACAD11Q709F0 780 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 SPATA21Q7Z572 469 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 CPLX4Q7Z7G2 160 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 ANKRD46Q86W74 232 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 CHERPQ8IWX8 916 aaKnown RBP16.42■□□□□ 0.22
CCDC61-201ENST00000536603 SLC16A11Q8NCK7 471 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 OR56A1Q8NGH5 318 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 HOXB13Q92826 284 aaPredicted RBP16.42■□□□□ 0.22
CCDC61-201ENST00000536603 ZNF597Q96LX8 424 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 GNRHR2Q96P88 292 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 SIKE1Q9BRV8 207 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 CCDC28BQ9BUN5 200 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 OSBPL11Q9BXB4 747 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 GALNT9Q9HCQ5 603 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 TCF7L2Q9NQB0 619 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 MRTO4Q9UKD2 239 aaKnown RBP16.42■□□□□ 0.22
CCDC61-201ENST00000536603 PCDHGB4Q9UN71 923 aa16.42■□□□□ 0.22
CCDC61-201ENST00000536603 GNB5O14775 395 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 UBDO15205 165 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 SCN2BO60939 215 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 KCNH1O95259 989 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 CPSF4O95639 269 aaKnown RBP16.41■□□□□ 0.22
CCDC61-201ENST00000536603 IDO1P14902 403 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 S100A3P33764 101 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 SOAT1P35610 550 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 PRIM2P49643 509 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 ARFIP2P53365 341 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 MRPS22P82650 360 aaKnown RBP16.41■□□□□ 0.22
CCDC61-201ENST00000536603 LASP1Q14847 261 aaKnown RBP16.41■□□□□ 0.22
CCDC61-201ENST00000536603 DUSP5Q16690 384 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 DPY19L1Q2PZI1 675 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 FNDC7Q5VTL7 733 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 ANGPTL8Q6UXH0 198 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 FGD2Q7Z6J4 655 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 VPS37AQ8NEZ2 397 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 OR4A15Q8NGL6 344 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 OR5AK3PQ8NH89 298 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 STON2Q8WXE9 905 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 JADE3Q92613 823 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 NTNG2Q96CW9 530 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 OTUB1Q96FW1 271 aaPredicted RBP16.41■□□□□ 0.22
CCDC61-201ENST00000536603 RMND5BQ96G75 393 aaPredicted RBP16.41■□□□□ 0.22
CCDC61-201ENST00000536603 TMEM41AQ96HV5 264 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 ZBTB18Q99592 522 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 NSRP1Q9H0G5 558 aaKnown RBP16.41■□□□□ 0.22
CCDC61-201ENST00000536603 LDAHQ9H6V9 325 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 ZNF703Q9H7S9 590 aaPredicted RBP16.41■□□□□ 0.22
CCDC61-201ENST00000536603 PLSCR2Q9NRY7 297 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 B4GALT7Q9UBV7 327 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 ZNF835Q9Y2P0 537 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 MEMO1Q9Y316 297 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 LIPGQ9Y5X9 500 aa16.41■□□□□ 0.22
CCDC61-201ENST00000536603 GTF3C1Q12789 2109 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 ZNF407Q9C0G0 2248 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 IL33O95760 270 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 ALOX5P09917 674 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 CAPN3P20807 821 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 PTGS2P35354 604 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 DGKQP52824 942 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 PSMD4P55036 377 aaKnown RBP16.4■□□□□ 0.22
CCDC61-201ENST00000536603 GSTA3Q16772 222 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 PDCD4Q53EL6 469 aaKnown RBP16.4■□□□□ 0.22
CCDC61-201ENST00000536603 EXOSC6Q5RKV6 272 aaKnown RBP16.4■□□□□ 0.22
CCDC61-201ENST00000536603 TIGD3Q6B0B8 471 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 ARHGAP11AQ6P4F7 1023 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 CLEC4FQ8N1N0 589 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 OR1J4Q8NGS1 313 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 SFXN5Q8TD22 340 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 MOAP1Q96BY2 351 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 GPATCH2Q9NW75 528 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 FAF1Q9UNN5 650 aaPredicted RBP16.4■□□□□ 0.22
CCDC61-201ENST00000536603 CSMD2Q7Z408 3487 aa16.4■□□□□ 0.22
CCDC61-201ENST00000536603 NCOA6Q14686 2063 aaPredicted RBP16.39■□□□□ 0.21
CCDC61-201ENST00000536603 PKDREJQ9NTG1 2253 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 SLC22A3O75751 556 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 TRAPPC6AO75865 159 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 FAM107AO95990 144 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 IGKV1D-16P01601 117 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 IGHG3P01860 377 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 CD1EP15812 388 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 GDF1P27539 372 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 CBX1P83916 185 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 TLE4Q04727 773 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 CDSNQ15517 529 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 BHLHB9Q6PI77 547 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 Q6ZPB1 254 aaPredicted RBP16.39■□□□□ 0.21
CCDC61-201ENST00000536603 NCCRP1Q6ZVX7 275 aaPredicted RBP16.39■□□□□ 0.21
CCDC61-201ENST00000536603 TRILQ7L0X0 811 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 GALNT10Q86SR1 603 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 CDH24Q86UP0 819 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 COX18Q8N8Q8 333 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 GLB1L3Q8NCI6 653 aaPredicted RBP16.39■□□□□ 0.21
CCDC61-201ENST00000536603 ADAMTS15Q8TE58 950 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 CA5BP1Q8WTZ4 195 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 ACTRT3Q9BYD9 372 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 EXO5Q9H790 373 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 FAM120CQ9NX05 1096 aaKnown RBP16.39■□□□□ 0.21
CCDC61-201ENST00000536603 QPCTLQ9NXS2 382 aa16.39■□□□□ 0.21
CCDC61-201ENST00000536603 FLRT3Q9NZU0 649 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms