RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 RGS1Q08116 209 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 LTB4RQ15722 352 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 PUS10Q3MIT2 529 aaKnown RBP14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 PYDC2Q56P42 97 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 ZNF776Q68DI1 518 aaPredicted RBP14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 METAP1DQ6UB28 335 aaPredicted RBP14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 FRRS1Q6ZNA5 592 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 ZNF620Q6ZNG0 422 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 VN1R4Q7Z5H5 301 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 PAQR7Q86WK9 346 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 PEX5LQ8IYB4 626 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 KLHL36Q8N4N3 616 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 PSD4Q8NDX1 1056 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 OR2T33Q8NG76 320 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 OR4F15Q8NGB8 312 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 OR4E2Q8NGC2 313 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 OR52N1Q8NH53 320 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 OR14C36Q8NHC7 312 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 GANCQ8TET4 914 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 LCN9Q8WX39 176 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 ST6GAL2Q96JF0 529 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 JAM3Q9BX67 310 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 CACYBPQ9HB71 228 aaKnown RBP14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 NTN1O95631 604 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 LALBAP00709 142 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 MYOGP15173 224 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 IGFALSP35858 605 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 ZNF155Q12901 538 aaPredicted RBP14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 PGGHGQ32M88 737 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 C11orf74Q86VG3 221 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 YAF2Q8IY57 180 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 SLC7A5P1Q8MH63 180 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 OR7G2Q8NG99 324 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 SOSTQ9BQB4 213 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 C11orf54Q9H0W9 315 aaPredicted RBP14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 C6orf106Q9H6K1 298 aaPredicted RBP14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 SYNDIG1Q9H7V2 258 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 KRCC1Q9NPI7 259 aaPredicted RBP14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 KLF15Q9UIH9 416 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 ZNF443Q9Y2A4 671 aaPredicted RBP14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 WDR45Q9Y484 360 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 CENPXA8MT69 81 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 LRRTM2O43300 516 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 PLRG1O43660 514 aaKnown RBP14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 IDH3BO43837 385 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 NDUFV2P19404 249 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 CELP19835 753 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 GALP22466 123 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 PTBP1P26599 531 aaKnown RBP eCLIP14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 NDUFS1P28331 727 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 ATP6V1E1P36543 226 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 CD79BP40259 229 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 GPR4P46093 362 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 GPM6BQ13491 265 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 ARHGAP11BQ3KRB8 267 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 ASPGQ86U10 573 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 OR2L13Q8N349 312 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 VWA5B2Q8N398 1253 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 OR4K14Q8NGD5 310 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 TMEM255BQ8WV15 326 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 COL26A1Q96A83 441 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 ASB6Q9NWX5 421 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 KCMF1Q9P0J7 381 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 CBLCQ9ULV8 474 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 NTNG1Q9Y2I2 539 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 CDH10Q9Y6N8 788 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 SCN3AQ9NY46 2000 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 FAM172BPA6NC97 362 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 CFL1P23528 166 aaKnown RBP14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 DUSP8Q13202 625 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 ZFP69Q49AA0 526 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 ZNF362Q5T0B9 420 aaPredicted RBP14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 FAM111BQ6SJ93 734 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 GATAD2AQ86YP4 633 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 ZFP41Q8N8Y5 198 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 ATP6V1C2Q8NEY4 427 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 NT5CQ8TCD5 201 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 CDS1Q92903 461 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 SLC22A18Q96BI1 424 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 ARMC5Q96C12 935 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 SECISBP2Q96T21 854 aaKnown RBP14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 HDHD5Q9BXW7 423 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 MMP28Q9H239 520 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 PPP1R3EQ9H7J1 279 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 COMMD3Q9UBI1 195 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 PHF11Q9UIL8 331 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 POLHQ9Y253 713 aa14.96□□□□□ -0.01
CHMP1A-202ENST00000535997 TFECO14948 347 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-202ENST00000535997 PLA2G10O15496 165 aa14.95□□□□□ -0.02
CHMP1A-202ENST00000535997 ZNF888P0CJ79 500 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-202ENST00000535997 CPN2P22792 545 aa14.95□□□□□ -0.02
CHMP1A-202ENST00000535997 TNFRSF17Q02223 184 aa14.95□□□□□ -0.02
CHMP1A-202ENST00000535997 Q8N9G6 341 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-202ENST00000535997 DNAJA4Q8WW22 397 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-202ENST00000535997 FAM131CQ96AQ9 280 aa14.95□□□□□ -0.02
CHMP1A-202ENST00000535997 RIPOR3Q96MK2 946 aa14.95□□□□□ -0.02
CHMP1A-202ENST00000535997 DEPDC7Q96QD5 511 aa14.95□□□□□ -0.02
CHMP1A-202ENST00000535997 PLA2G2FQ9BZM2 168 aa14.95□□□□□ -0.02
CHMP1A-202ENST00000535997 MKRN2Q9H000 416 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms