RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 SLC41A3Q96GZ6 507 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 WDFY2Q96P53 400 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 TM9SF2Q99805 663 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 TEX12Q9BXU0 123 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 ABCB9Q9NP78 766 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 ZNF624Q9P2J8 865 aaPredicted RBP12.3□□□□□ -0.44
LDLR-203ENST00000535915 IL20RAQ9UHF4 553 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 ZNF443Q9Y2A4 671 aaPredicted RBP12.3□□□□□ -0.44
LDLR-203ENST00000535915 TNFRSF10AO00220 468 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 DYRK3O43781 588 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 PIP5K1CO60331 668 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 NDUFS1P28331 727 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 SDC2P34741 201 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 TNFRSF4P43489 277 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 NKX2-5P52952 324 aaPredicted RBP12.29□□□□□ -0.44
LDLR-203ENST00000535915 COPZ1P61923 177 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 BAK1Q16611 211 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 PUS10Q3MIT2 529 aaKnown RBP12.29□□□□□ -0.44
LDLR-203ENST00000535915 DEFB134Q4QY38 66 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 SDE2Q6IQ49 451 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 HEPHL1Q6MZM0 1159 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 CDC73Q6P1J9 531 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 FAM131AQ6UXB0 335 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 GDF7Q7Z4P5 450 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 NRARPQ7Z6K4 114 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 PEX5LQ8IYB4 626 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 CLDN22Q8N7P3 220 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 ZFP41Q8N8Y5 198 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 OR4K14Q8NGD5 310 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 OR4Q3Q8NH05 313 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 TMEM255BQ8WV15 326 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 RFKQ969G6 155 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 TIGARQ9NQ88 270 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 KLF15Q9UIH9 416 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 CA5BQ9Y2D0 317 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 WDR45Q9Y484 360 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 A0A1W2PQL4 384 aaPredicted RBP12.29□□□□□ -0.44
LDLR-203ENST00000535915 LIMS3P0CW19 117 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 LIMS4P0CW20 117 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 FPR3P25089 353 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 CD79BP40259 229 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 STAT5AP42229 794 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 SLC9A3P48764 834 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 SIM1P81133 766 aaPredicted RBP12.29□□□□□ -0.44
LDLR-203ENST00000535915 TPBGQ13641 420 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 FAM209AQ5JX71 171 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 CCL4L1Q8NHW4 92 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 SETD6Q8TBK2 473 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 TSACCQ96A04 125 aaPredicted RBP12.29□□□□□ -0.44
LDLR-203ENST00000535915 ELSPBP1Q96BH3 223 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 SRRQ9GZT4 340 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 MTHFD2LQ9H903 347 aaPredicted RBP12.29□□□□□ -0.44
LDLR-203ENST00000535915 PLEKHB1Q9UF11 243 aaPredicted RBP12.29□□□□□ -0.44
LDLR-203ENST00000535915 PHF11Q9UIL8 331 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 GSTK1Q9Y2Q3 226 aa12.29□□□□□ -0.44
LDLR-203ENST00000535915 LINC00854A0A1B0GVQ3 168 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 SLC35F4A4IF30 521 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 H0Y8X5 98 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 SURF4O15260 269 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 AGR2O95994 175 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 THY1P04216 161 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 IL7P13232 177 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 ACTR1BP42025 376 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 OR2B6P58173 313 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 ACTR1AP61163 376 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 SUZ12Q15022 739 aaKnown RBP12.28□□□□□ -0.44
LDLR-203ENST00000535915 FBXO42Q6P3S6 717 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 IQCF2Q8IXL9 164 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 SYT14Q8NB59 555 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 OR4F15Q8NGB8 312 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 LILRB4Q8NHJ6 448 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 NT5CQ8TCD5 201 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 SLC22A18Q96BI1 424 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 ARHGAP9Q9BRR9 750 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 IL20Q9NYY1 176 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 SLC7A7Q9UM01 511 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 CLCA2Q9UQC9 943 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 SF3B6Q9Y3B4 125 aaKnown RBP12.28□□□□□ -0.44
LDLR-203ENST00000535915 HOXB2P14652 356 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 EN2P19622 333 aaPredicted RBP12.28□□□□□ -0.44
LDLR-203ENST00000535915 SLC1A3P43003 542 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 GPR68Q15743 365 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 AGAP6Q5VW22 663 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 ZNF836Q6ZNA1 936 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 QSOX2Q6ZRP7 698 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 MBOAT2Q6ZWT7 520 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 GALNT12Q8IXK2 581 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 CAMKK1Q8N5S9 505 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 GALNT6Q8NCL4 622 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 FAM131CQ96AQ9 280 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 DIRAS2Q96HU8 199 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 AGAP4Q96P64 663 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 MIXL1Q9H2W2 232 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 ISYNA1Q9NPH2 558 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 KCMF1Q9P0J7 381 aa12.28□□□□□ -0.44
LDLR-203ENST00000535915 FABP12A6NFH5 140 aa12.27□□□□□ -0.44
LDLR-203ENST00000535915 RFXAPO00287 272 aa12.27□□□□□ -0.44
LDLR-203ENST00000535915 LINC01565O15544 149 aa12.27□□□□□ -0.44
LDLR-203ENST00000535915 P2RX6O15547 441 aa12.27□□□□□ -0.44
LDLR-203ENST00000535915 DNAJB6O75190 326 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms