RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 MED20Q9H944 212 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 PELI2Q9HAT8 420 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 FGF22Q9HCT0 170 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 POLD4Q9HCU8 107 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 DYRK4Q9NR20 520 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 TEKT2Q9UIF3 430 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 LNPEPQ9UIQ6 1025 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 FBXL4Q9UKA2 621 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 GAB2Q9UQC2 676 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 ERVW-1Q9UQF0 538 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 SCML2Q9UQR0 700 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 COLEC10Q9Y6Z7 277 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 ZGRF1Q86YA3 2104 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 UBE4BO95155 1302 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 MDC1Q14676 2089 aaKnown RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 PDZD2O15018 2839 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 FEZF1A0PJY2 475 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 LRRD1A4D1F6 860 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 C17orf105B2RV13 164 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 NTN3O00634 580 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 FPGTO14772 594 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 ALOX15BO15296 676 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 FAM189A1O60320 539 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CYTIPO60759 359 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CEACAM4O75871 244 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 PLGP00747 810 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 IGHDP01880 384 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CSF2P04141 144 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 KRT7P08729 469 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CTSEP14091 401 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CD1EP15812 388 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 GNB3P16520 340 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 GAP43P17677 238 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 TNNI1P19237 187 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 TCN2P20062 427 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 FRKP42685 505 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CLDN6P56747 220 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 DCDC1P59894 354 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 SNRPFP62306 86 aaKnown RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 RPP38P78345 283 aaKnown RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 GUCY2DQ02846 1103 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 SLC3A1Q07837 685 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 RASGEF1BQ0VAM2 473 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 TRA2AQ13595 282 aaKnown RBP eCLIP2.86□□□□□ -1.952e-56■■■■□ 20.9
SNHG1-202ENST00000535689 ELAVL3Q14576 367 aaKnown RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 ELOCQ15369 112 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 ACKR1Q16570 336 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CDKN3Q16667 212 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 TYSND1Q2T9J0 566 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CTU2Q2VPK5 515 aaKnown RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 C2orf76Q3KRA6 126 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 ZFP69Q49AA0 526 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 DCAF12Q5T6F0 453 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 ALKBH5Q6P6C2 394 aaKnown RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CYB5D1Q6P9G0 228 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 TMEM207Q6UWW9 146 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 GSG1LQ6UXU4 331 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 ZNF720Q7Z2F6 126 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 GKN2Q86XP6 184 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 WDR49Q8IV35 697 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 MMAAQ8IVH4 418 aaKnown RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 DAW1Q8N136 415 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 GPD1LQ8N335 351 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 GPATCH11Q8N954 259 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 NUP37Q8NFH4 326 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 OR7G3Q8NG95 312 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 OR1L3Q8NH93 324 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 SPATA3Q8NHX4 192 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 FIBINQ8TAL6 211 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 OR8D1Q8WZ84 308 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 SENP5Q96HI0 755 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CDKN2AIPNLQ96HQ2 116 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 PPP1R16AQ96I34 528 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CCDC3Q9BQI4 270 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 FAM213AQ9BRX8 229 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 ATG101Q9BSB4 218 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 MCRIP2Q9BUT9 160 aaKnown RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CALN1Q9BXU9 219 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 WWTR1Q9GZV5 400 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 HOXD1Q9GZZ0 328 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CSNK1G1Q9HCP0 422 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 B3GAT2Q9NPZ5 323 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 ZNF71Q9NQZ8 489 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 GPR173Q9NS66 373 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 PANK4Q9NVE7 773 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 RBAKQ9NYW8 714 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 TRPC4Q9UBN4 977 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 EPHA6Q9UF33 1036 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CYTH4Q9UIA0 394 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 GGA2Q9UJY4 613 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 ENTPD4Q9Y227 616 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 HBS1LQ9Y450 684 aaKnown RBP2.86□□□□□ -1.95
SNHG1-202ENST00000535689 KIF3AQ9Y496 699 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CHD5Q8TDI0 1954 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 TACC2O95359 2948 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 BSNQ9UPA5 3926 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 CELSR1Q9NYQ6 3014 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 MYO7BQ6PIF6 2116 aa2.86□□□□□ -1.95
SNHG1-202ENST00000535689 HIVEP3Q5T1R4 2406 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms