RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 CFL2Q9Y281 166 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 GPR55Q9Y2T6 319 aaPredicted RBP7.3□□□□□ -1.24
CLIP1-206ENST00000535290 REXO2Q9Y3B8 237 aaKnown RBP7.3□□□□□ -1.24
CLIP1-206ENST00000535290 NPIPA5A0A0B4J1W7 369 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 NPIPA7E9PJI5 369 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 ICMTO60725 284 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 LILRA1O75019 489 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 STK16O75716 305 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 SYNGR4O95473 234 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 CLDN9O95484 217 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 NPIPA8P0DM63 369 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 CT45A8P0DMV1 189 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 CT45A9P0DMV2 189 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 MLNP12872 115 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 ZFP36P26651 326 aaKnown RBP7.29□□□□□ -1.24
CLIP1-206ENST00000535290 APEX1P27695 318 aaKnown RBP7.29□□□□□ -1.24
CLIP1-206ENST00000535290 GGT5P36269 586 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 MAGEA3P43357 314 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 CDH15P55291 814 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 CORO7P57737 925 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 MAP4K2Q12851 820 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 EFR3AQ14156 821 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 E2F2Q14209 437 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 ZNF460Q14592 562 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 TGFBIQ15582 683 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 TMEM44Q2T9K0 475 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 MST1LQ2TV78 715 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 TRMT12Q53H54 448 aaKnown RBP7.29□□□□□ -1.24
CLIP1-206ENST00000535290 C4orf48Q5BLP8 95 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 CT45A2Q5DJT8 189 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 C6orf163Q5TEZ5 329 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 ZNF544Q6NX49 715 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 MED27Q6P2C8 311 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 CYP20A1Q6UW02 462 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 USP43Q70EL4 1123 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 FRA10AC1Q70Z53 315 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 LARP4Q71RC2 724 aaKnown RBP eCLIP7.29□□□□□ -1.24
CLIP1-206ENST00000535290 CNTN4Q8IWV2 1026 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 TUSC5Q8IXB3 177 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 CCDC170Q8IYT3 715 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 ZNF511Q8NB15 262 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 OR4K14Q8NGD5 310 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 HUS1BQ8NHY5 278 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 EFHD2Q96C19 240 aaPredicted RBP7.29□□□□□ -1.24
CLIP1-206ENST00000535290 MUCL1Q96DR8 90 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 MTERF1Q99551 399 aaKnown RBP7.29□□□□□ -1.24
CLIP1-206ENST00000535290 INPP5KQ9BT40 448 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 DDX31Q9H8H2 851 aaKnown RBP7.29□□□□□ -1.24
CLIP1-206ENST00000535290 LYARQ9NX58 379 aaKnown RBP7.29□□□□□ -1.24
CLIP1-206ENST00000535290 FLRT3Q9NZU0 649 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 CTNNAL1Q9UBT7 734 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 WBP11Q9Y2W2 641 aaKnown RBP7.29□□□□□ -1.24
CLIP1-206ENST00000535290 PMF1-BGLAPU3KQ54 211 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 ARFGEF3Q5TH69 2177 aa7.29□□□□□ -1.24
CLIP1-206ENST00000535290 A0A0J9YW62 118 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 ESPNB1AK53 854 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 TNFSF11O14788 317 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 ADAMDEC1O15204 470 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 GMFGO60234 142 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 DHRS4L1P0CG22 281 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 BMP4P12644 408 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 PORP16435 677 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-206ENST00000535290 EDNRAP25101 427 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 CD40P25942 277 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 EVI2BP34910 448 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 FEN1P39748 380 aaKnown RBP7.28□□□□□ -1.24
CLIP1-206ENST00000535290 LIMS1P48059 325 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 ZNF83P51522 516 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 DVL1P1P54792 670 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-206ENST00000535290 CHRNB3Q05901 458 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 DUSP2Q05923 314 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 TBX2Q13207 712 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-206ENST00000535290 GANABQ14697 944 aaKnown RBP7.28□□□□□ -1.24
CLIP1-206ENST00000535290 CRYMQ14894 314 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 LINC01559Q495D7 138 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 GLYR1Q49A26 553 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-206ENST00000535290 TMEM201Q5SNT2 666 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 TIMM23BQ5SRD1 257 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 SEL1L2Q5TEA6 688 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 DRICH1Q6PGQ1 229 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-206ENST00000535290 TMEM108Q6UXF1 575 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 NPSR1Q6W5P4 371 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 ADAMTSL2Q86TH1 951 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 SPATA6LQ8N4H0 392 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 ANKS4BQ8N8V4 417 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 ZNF540Q8NDQ6 660 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 OR4N2Q8NGD1 307 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 OR2V1Q8NHB1 315 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 DUSP19Q8WTR2 217 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 OSTF1Q92882 214 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 HPS1Q92902 700 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 UBE2E3Q969T4 207 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 SNX18Q96RF0 628 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 NPAS1Q99742 590 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 PKP2Q99959 881 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 CENPKQ9BS16 269 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 LRRC1Q9BTT6 524 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 PTGES2Q9H7Z7 377 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 CNOT10Q9H9A5 744 aaKnown RBP7.28□□□□□ -1.24
CLIP1-206ENST00000535290 ANKRA2Q9H9E1 313 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms