RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 CROCCP3Q8IVE0 287 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 CFAP206Q8IYR0 622 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 SPERTQ8NA61 448 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 OR4C3Q8NH37 302 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 OR2T6Q8NHC8 308 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 URGCPQ8TCY9 931 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 ACMSDQ8TDX5 336 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 SSMEM1Q8WWF3 244 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 STARD8Q92502 1023 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 DGCR14Q96DF8 476 aaKnown RBP2.99□□□□□ -1.93
USP48-215ENST00000534705 MOCOSQ96EN8 888 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 SGF29Q96ES7 293 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 TMA16Q96EY4 203 aaKnown RBP2.99□□□□□ -1.93
USP48-215ENST00000534705 B3GALT6Q96L58 329 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 IFT74Q96LB3 600 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 KLHL5Q96PQ7 755 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 SEPHS2Q99611 448 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 GPR88Q9GZN0 384 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 ZNF350Q9GZX5 532 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 RIBC2Q9H4K1 309 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 NCOR1P1Q9H4R4 102 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 DCLRE1BQ9H816 532 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 NOL11Q9H8H0 719 aaKnown RBP2.99□□□□□ -1.93
USP48-215ENST00000534705 TBC1D17Q9HA65 648 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 C12orf10Q9HB07 376 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 PARVGQ9HBI0 331 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 LZTFL1Q9NQ48 299 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 OLAHQ9NV23 265 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 ETNK2Q9NVF9 386 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 NMRK1Q9NWW6 199 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 GIN1Q9NXP7 522 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 UBAP1Q9NZ09 502 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 AIPL1Q9NZN9 384 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 FAM153AQ9UHL3 310 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 LNPEPQ9UIQ6 1025 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 ADAM28Q9UKQ2 775 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 EXOGQ9Y2C4 368 aaKnown RBP2.99□□□□□ -1.93
USP48-215ENST00000534705 TDRKHQ9Y2W6 561 aaKnown RBP2.99□□□□□ -1.93
USP48-215ENST00000534705 NOSIPQ9Y314 301 aaKnown RBP2.99□□□□□ -1.93
USP48-215ENST00000534705 PCDHGA1Q9Y5H4 931 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 HEY1Q9Y5J3 304 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 CLCA3PQ9Y6N3 262 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 SHROOM3Q8TF72 1996 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 CACNA1HO95180 2353 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 FRYLO94915 3013 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 ABCA7Q8IZY2 2146 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 MUC22E2RYF6 1773 aaPredicted RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 TRBV2A0A0J9YWF9 115 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 A0A0J9YWU9 116 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 ANKRD61A6NGH8 418 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 CASTOR2A6NHX0 329 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 A8MUI8 341 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 LOC730098B7Z3J9 87 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 H0YCG3 227 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 GOLGA8TH3BQL2 631 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 BOLA2-SMG1P6H3BVE0 249 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 SGK1O00141 431 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 CASQ2O14958 399 aaPredicted RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 OGTO15294 1046 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 NVLO15381 856 aaKnown RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 TEX28O15482 410 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 ADAM12O43184 909 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 SSX5O60225 188 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 GMFGO60234 142 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 PFDN1O60925 122 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 SUPT3HO75486 399 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 MOCS3O95396 460 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 CXCL14O95715 111 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 FAM58BPP0C7Q3 252 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 CXCL8P10145 99 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 PRG2P13727 222 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 PFKFB1P16118 471 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 CCNCP24863 283 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 CRABP2P29373 138 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 HSD17B3P37058 310 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 MAGEA4P43358 317 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 BRCC3P46736 316 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 RABIFP47224 123 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 OR1G1P47890 313 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 ARFIP1P53367 373 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 CDH13P55290 713 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 NME5P56597 212 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 OSTNP61366 133 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 GFPT1Q06210 699 aaPredicted RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 RBPJQ06330 500 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 CETN1Q12798 172 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 TRA2AQ13595 282 aaKnown RBP eCLIP2.98□□□□□ -1.93
USP48-215ENST00000534705 CUL1Q13616 776 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 CYLC2Q14093 348 aaPredicted RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 STK38Q15208 465 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 TGFBIQ15582 683 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 CDO1Q16878 200 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 HFEQ30201 348 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 SYT14P1Q58G82 188 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 XKR6Q5GH73 641 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 CCNJQ5T5M9 372 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 CES4AQ5XG92 561 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 KCTD16Q68DU8 428 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 PRR27Q6MZM9 219 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 NEK5Q6P3R8 708 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms