RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 PPCDCQ96CD2 204 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 FAM120BQ96EK7 910 aaKnown RBP8.72□□□□□ -1.01
SSBP3-215ENST00000533946 ZNF845Q96IR2 970 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-215ENST00000533946 TEX37Q96LM6 180 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 CCT7Q99832 543 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 ROPN1BQ9BZX4 212 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-215ENST00000533946 CENPHQ9H3R5 247 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 ROPN1Q9HAT0 212 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-215ENST00000533946 DDX18Q9NVP1 670 aaKnown RBP8.72□□□□□ -1.01
SSBP3-215ENST00000533946 GIN1Q9NXP7 522 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 QPCTLQ9NXS2 382 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 CRIM1Q9NZV1 1036 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 SENP1Q9P0U3 644 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 CBLCQ9ULV8 474 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 ZNF337Q9Y3M9 751 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 OR10H1Q9Y4A9 318 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 ACANP16112 2415 aa8.71□□□□□ -1.01
SSBP3-215ENST00000533946 MTORP42345 2549 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 CLCA1A8K7I4 914 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 SCAMP2O15127 329 aaKnown RBP8.71□□□□□ -1.02
SSBP3-215ENST00000533946 EFNA2O43921 213 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 BCAS1O75363 584 aaPredicted RBP8.71□□□□□ -1.02
SSBP3-215ENST00000533946 CBR3O75828 277 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 NKX2-2O95096 273 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 IL33O95760 270 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 C6orf47O95873 294 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 CD1EP15812 388 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 DPP4P27487 766 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 SHC1P29353 583 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 IL12BP29460 328 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 NTSP30990 170 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 UQCRC1P31930 480 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 TMED10P49755 219 aaKnown RBP8.71□□□□□ -1.02
SSBP3-215ENST00000533946 PNLIPRP2P54317 469 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 MANFP55145 182 aaKnown RBP8.71□□□□□ -1.02
SSBP3-215ENST00000533946 NME5P56597 212 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 DCAF7P61962 342 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 CD226Q15762 336 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 TBCELQ5QJ74 424 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 CEP85LQ5SZL2 805 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.71□□□□□ -1.02
SSBP3-215ENST00000533946 RIPPLY2Q5TAB7 128 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 NSUN5P2Q63ZY6 315 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 MFSD12Q6NUT3 480 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 SZRD1Q7Z422 152 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 ADGRE4PQ86SQ3 457 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 NUDCD3Q8IVD9 361 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 UBQLNLQ8IYU4 475 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 C7orf57Q8NEG2 295 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 FAM76AQ8TAV0 307 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 FAM110BQ8TC76 370 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 GPR151Q8TDV0 419 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.71□□□□□ -1.022e-9■■■■■ 80.1
SSBP3-215ENST00000533946 CDS1Q92903 461 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 INTS12Q96CB8 462 aaKnown RBP8.71□□□□□ -1.02
SSBP3-215ENST00000533946 IQCGQ9H095 443 aaKnown RBP8.71□□□□□ -1.02
SSBP3-215ENST00000533946 AKTIPQ9H8T0 292 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 PPCSQ9HAB8 311 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 GIMAP4Q9NUV9 329 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 TAS2R9Q9NYW1 312 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 NTMQ9P121 344 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 CLCF1Q9UBD9 225 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 B4GALT7Q9UBV7 327 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 ATP6V1HQ9UI12 483 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 CFL2Q9Y281 166 aa8.71□□□□□ -1.02
SSBP3-215ENST00000533946 OR2M5A3KFT3 312 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 CCDC151A5D8V7 595 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 MBD3L4A6NDZ8 208 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-215ENST00000533946 MBD3L3A6NE82 208 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-215ENST00000533946 MBD3L5A6NJ08 208 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-215ENST00000533946 AHRRA9YTQ3 701 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 ANKRD28O15084 1053 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 CTIFO43310 598 aaKnown RBP8.7□□□□□ -1.02
SSBP3-215ENST00000533946 KCNK2O95069 426 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 NTN1O95631 604 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 OXSR1O95747 527 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-215ENST00000533946 HMGN2P05204 90 aaKnown RBP8.7□□□□□ -1.02
SSBP3-215ENST00000533946 ALDOCP09972 364 aaKnown RBP8.7□□□□□ -1.02
SSBP3-215ENST00000533946 PRPS2P11908 318 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 ZNF708P17019 499 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 KLK2P20151 261 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 SRD5A2P31213 254 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 GPC1P35052 558 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 PTGER4P35408 488 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 SLC6A8P48029 635 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 SNTA1Q13424 505 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 LASP1Q14847 261 aaKnown RBP8.7□□□□□ -1.02
SSBP3-215ENST00000533946 TOMM34Q15785 309 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-215ENST00000533946 CYP27C1Q4G0S4 372 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 OR4F3Q6IEY1 312 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 VWA1Q6PCB0 445 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 RNF165Q6ZSG1 346 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 IKBIPQ70UQ0 350 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 ANKRD46Q86W74 232 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 RIBC1Q8N443 379 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-215ENST00000533946 ANKRD42Q8N9B4 389 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 OR5D16Q8NGK9 328 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 MBD3L2Q8NHZ7 208 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-215ENST00000533946 POC1BQ8TC44 478 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 MGARPQ8TDB4 240 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms