RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 GPR18Q14330 331 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 TRAM2Q15035 370 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 SEC23BQ15437 767 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 TMEM44Q2T9K0 475 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 ARHGAP11BQ3KRB8 267 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 GPAT3Q53EU6 434 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 EIPR1Q53HC9 387 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 PLAG1Q6DJT9 500 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 MFSD12Q6NUT3 480 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 FAM180BQ6P0A1 224 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 TMEM107Q6UX40 140 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 CASP12Q6UXS9 341 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 DEF8Q6ZN54 512 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 CCDC81Q6ZN84 652 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 PTCHD4Q6ZW05 846 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 FAM26EQ8N5C1 309 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 KCT2Q8NC54 265 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 MORN4Q8NDC4 146 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 OR4D11Q8NGI4 311 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 OR5D16Q8NGK9 328 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 SLC7A13Q8TCU3 470 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 DYNC2LI1Q8TCX1 351 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 GNPDA2Q8TDQ7 276 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 ADAMTS15Q8TE58 950 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 HOXB13Q92826 284 aaPredicted RBP9.03□□□□□ -0.96
CHKA-207ENST00000533728 UBE2FQ969M7 185 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 GTPBP3Q969Y2 492 aaKnown RBP9.03□□□□□ -0.96
CHKA-207ENST00000533728 RERGQ96A58 199 aaPredicted RBP9.03□□□□□ -0.96
CHKA-207ENST00000533728 PSMG3-AS1Q96PY0 264 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 PRRG3Q9BZD7 231 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 SAP130Q9H0E3 1048 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 DUSP15Q9H1R2 295 aaPredicted RBP9.03□□□□□ -0.96
CHKA-207ENST00000533728 SYNPO2LQ9H987 977 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 CACYBPQ9HB71 228 aaKnown RBP9.03□□□□□ -0.96
CHKA-207ENST00000533728 IL21RQ9HBE5 538 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 MRPS18AQ9NVS2 196 aaKnown RBP9.03□□□□□ -0.96
CHKA-207ENST00000533728 C19orf53Q9UNZ5 99 aaPredicted RBP9.03□□□□□ -0.96
CHKA-207ENST00000533728 RPL36Q9Y3U8 105 aaKnown RBP9.03□□□□□ -0.96
CHKA-207ENST00000533728 ADAMTS9Q9P2N4 1935 aa9.03□□□□□ -0.96
CHKA-207ENST00000533728 NUP210LQ5VU65 1888 aa9.02□□□□□ -0.96
CHKA-207ENST00000533728 SNTNA6NMZ2 147 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 PATE3B3GLJ2 98 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 H0Y8X5 98 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 M0R082 166 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 PLOD3O60568 738 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 OR5F1O95221 314 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 EPPINO95925 133 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 TP53P04637 393 aaPredicted RBP9.02□□□□□ -0.97
CHKA-207ENST00000533728 ATP1B1P05026 303 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 RPLP0P05388 317 aaKnown RBP9.02□□□□□ -0.97
CHKA-207ENST00000533728 ADORA3P0DMS8 318 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 CPMP14384 443 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 PORP16435 677 aaPredicted RBP9.02□□□□□ -0.97
CHKA-207ENST00000533728 MAGP20916 626 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 ENDOUP21128 410 aaKnown RBP9.02□□□□□ -0.97
CHKA-207ENST00000533728 RPS4Y1P22090 263 aaKnown RBP9.02□□□□□ -0.97
CHKA-207ENST00000533728 FEN1P39748 380 aaKnown RBP9.02□□□□□ -0.97
CHKA-207ENST00000533728 MC3RP41968 323 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 CDK5Q00535 292 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 ST3GAL4Q11206 333 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 EIF2B5Q13144 721 aaKnown RBP9.02□□□□□ -0.97
CHKA-207ENST00000533728 DUSP8Q13202 625 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 DECR1Q16698 335 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 TIGD6Q17RP2 521 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 ZSWIM7Q19AV6 140 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 INAVAQ3KP66 663 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 CYP27C1Q4G0S4 372 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 ZNF628Q5EBL2 1059 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 ZNF311Q5JNZ3 666 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 FHL5Q5TD97 284 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 MFSD4BQ5TF39 518 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 TUBA3EQ6PEY2 450 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 PODNL1Q6PEZ8 512 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 GDPGP1Q6ZNW5 385 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 Q6ZNX1 250 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 Q6ZPB1 254 aaPredicted RBP9.02□□□□□ -0.97
CHKA-207ENST00000533728 USP43Q70EL4 1123 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 C16orf62Q7Z3J2 963 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 RD3Q7Z3Z2 195 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 SZRD1Q7Z422 152 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 OOSP2Q86WS3 158 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 FAM20CQ8IXL6 584 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 SDR16C5Q8N3Y7 309 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 CLDN22Q8N7P3 220 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 MINDY2Q8NBR6 621 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 KBTBD8Q8NFY9 601 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 OR4K5Q8NGD3 323 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 OR9A2Q8NGT5 310 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 CCL4L1Q8NHW4 92 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 ADAMTS18Q8TE60 1221 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 DIO2Q92813 273 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 LGALS12Q96DT0 336 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 PLEKHA8Q96JA3 519 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 PIGUQ9H490 435 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 AKIP1Q9NQ31 210 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 DUSP22Q9NRW4 184 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 MAN2C1Q9NTJ4 1040 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 C2orf42Q9NWW7 574 aa9.02□□□□□ -0.97
CHKA-207ENST00000533728 WSB2Q9NYS7 404 aaPredicted RBP9.02□□□□□ -0.97
CHKA-207ENST00000533728 CCDC59Q9P031 241 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms