RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 ACVR1CQ8NER5 493 aa6.64□□□□□ -1.35
CTNND1-236ENST00000533667 TRMT10AQ8TBZ6 339 aaKnown RBP6.64□□□□□ -1.35
CTNND1-236ENST00000533667 FRS2Q8WU20 508 aa6.64□□□□□ -1.35
CTNND1-236ENST00000533667 MR1Q95460 341 aa6.64□□□□□ -1.35
CTNND1-236ENST00000533667 PRRC1Q96M27 445 aa6.64□□□□□ -1.35
CTNND1-236ENST00000533667 ZNF587Q96SQ5 575 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-236ENST00000533667 ZFYVE21Q9BQ24 234 aa6.64□□□□□ -1.35
CTNND1-236ENST00000533667 KCNK12Q9HB15 430 aa6.64□□□□□ -1.35
CTNND1-236ENST00000533667 IL21RQ9HBE5 538 aa6.64□□□□□ -1.35
CTNND1-236ENST00000533667 NLKQ9UBE8 527 aa6.64□□□□□ -1.35
CTNND1-236ENST00000533667 ERVK-19Q9WJR5 959 aa6.64□□□□□ -1.35
CTNND1-236ENST00000533667 GPR45Q9Y5Y3 372 aa6.64□□□□□ -1.35
CTNND1-236ENST00000533667 KDM3BQ7LBC6 1761 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 TCRBV21S2A2A0A5A6 115 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 FEZF1A0PJY2 475 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 LILRB3O75022 631 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 MITFO75030 526 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-236ENST00000533667 ALX3O95076 343 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 CDK1P06493 297 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 SDC1P18827 310 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 PRSS3P35030 304 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 LRRC37A5PQ49AS3 106 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 ANKRD54Q6NXT1 300 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 ZC3H14Q6PJT7 736 aaKnown RBP6.63□□□□□ -1.35
CTNND1-236ENST00000533667 TMPPEQ6ZT21 453 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 DPPA4Q7L190 304 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 GPR149Q86SP6 731 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 SLC51BQ86UW2 128 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 SLC35F2Q8IXU6 374 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 ZNF619Q8N2I2 560 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 GATSQ8NAP1 163 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 OR6C4Q8NGE1 309 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 TERB2Q8NHR7 220 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 WDR20Q8TBZ3 569 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 RELTQ969Z4 430 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 ALG8Q9BVK2 526 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 DPCDQ9BVM2 203 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-236ENST00000533667 BOCQ9BWV1 1114 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 SLC17A9Q9BYT1 436 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 QRSL1Q9H0R6 528 aaKnown RBP6.63□□□□□ -1.35
CTNND1-236ENST00000533667 NT5DC2Q9H857 520 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 POLHQ9Y253 713 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 SPO11Q9Y5K1 396 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 A0A0G2JMP0 313 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 ZNF850A8MQ14 1090 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 RTCAO00442 366 aaKnown RBP6.63□□□□□ -1.35
CTNND1-236ENST00000533667 SCGB2A1O75556 95 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 CCNOP22674 350 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 HOXC13P31276 330 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 CA5AP35218 305 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 RUNX3Q13761 415 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 TBCEQ15813 527 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-236ENST00000533667 SLC6A19Q695T7 634 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 ZNF551Q7Z340 670 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-236ENST00000533667 PDZD3Q86UT5 571 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 COMMD7Q86VX2 200 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 OR4M2Q8NGB6 313 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 OR5H2Q8NGV7 314 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 SNAPC3Q92966 411 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 C16orf58Q96GQ5 468 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 FN3KQ9H479 309 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 IL23AQ9NPF7 189 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 ANKMY1Q9P2S6 941 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 HSFX1Q9UBD0 423 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 APOBEC3BQ9UH17 382 aaKnown RBP6.63□□□□□ -1.35
CTNND1-236ENST00000533667 MED16Q9Y2X0 877 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 BAZ2AQ9UIF9 1905 aaKnown RBP6.63□□□□□ -1.35
CTNND1-236ENST00000533667 K7ERQ8 282 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 ACOT7O00154 380 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 LATO43561 262 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 OR2T1O43869 369 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 CTSAP10619 480 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 JUNDP17535 347 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 CD70P32970 193 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 HNRNPKP61978 463 aaKnown RBP eCLIP6.63□□□□□ -1.356e-14■□□□□ 9.1
CTNND1-236ENST00000533667 TAP2Q03519 686 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 RIN1Q13671 783 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 KIR2DS3Q14952 304 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 KCNJ8Q15842 424 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 SCD5Q86SK9 330 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 OR4K13Q8NH42 304 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 GPR148Q8TDV2 347 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 MOCOSQ96EN8 888 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 OR5B12Q96R08 314 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 CDC6Q99741 560 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 SPIN2AQ99865 258 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 SPIN2BQ9BPZ2 258 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 NUDT16L1Q9BRJ7 211 aaKnown RBP6.63□□□□□ -1.35
CTNND1-236ENST00000533667 INPP5KQ9BT40 448 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 PPIL3Q9H2H8 161 aaKnown RBP6.63□□□□□ -1.35
CTNND1-236ENST00000533667 MYH11P35749 1972 aa6.63□□□□□ -1.35
CTNND1-236ENST00000533667 CLDN24A6NM45 220 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 ZNF217O75362 1048 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 PLATP00750 562 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 AMY2AP04746 511 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 S100A8P05109 93 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 JMJD7P0C870 316 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 ITGB7P26010 798 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 OPRL1P41146 370 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 PER3P56645 1201 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms