RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SEC14L3Q9UDX4 400 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 ABCG2Q9UNQ0 655 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 TENM4Q6N022 2769 aa10.96□□□□□ -0.66
SSBP3-214ENST00000533209 EXPH5Q8NEV8 1989 aa10.96□□□□□ -0.66
SSBP3-214ENST00000533209 FLNCQ14315 2725 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 POLEQ07864 2286 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 A0A096LPI6 279 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 DUXAA6NLW8 204 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 C17orf51A8MQB3 221 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 ACOT7O00154 380 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 GNB5O14775 395 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 SNPHO15079 494 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 UNC5CO95185 931 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 ANP32DO95626 131 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 NGFRP08138 427 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 CELA3AP09093 270 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 OR12D1P0DN82 309 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 DRD4P21917 467 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 LCN1P31025 176 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 MASP1P48740 699 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 KHKP50053 298 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 MVDP53602 400 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 GNGT1P63211 74 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 COX20Q5RI15 118 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 C6orf10Q5SRN2 563 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 LRIF1Q5T3J3 769 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 TIGD3Q6B0B8 471 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 HEPHL1Q6MZM0 1159 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 TNFAIP8L2Q6P589 184 aaPredicted RBP10.95□□□□□ -0.66
SSBP3-214ENST00000533209 ANGPTL8Q6UXH0 198 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 GFRALQ6UXV0 394 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 APOOLQ6UXV4 268 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 RNF130Q86XS8 419 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 CHERPQ8IWX8 916 aaKnown RBP10.95□□□□□ -0.66
SSBP3-214ENST00000533209 FAM109AQ8N4B1 249 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 WDSUB1Q8N9V3 476 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 OR4C3Q8NH37 302 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 RAB8BQ92930 207 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 AURKBQ96GD4 344 aaPredicted RBP10.95□□□□□ -0.66
SSBP3-214ENST00000533209 GNRHR2Q96P88 292 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 ELAC2Q9BQ52 826 aaKnown RBP10.95□□□□□ -0.66
SSBP3-214ENST00000533209 G6PC3Q9BUM1 346 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 RTN4RQ9BZR6 473 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 UBQLN3Q9H347 655 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 SAR1AQ9NR31 198 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 C15orf41Q9Y2V0 281 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 PCDHB14Q9Y5E9 798 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 PCDHGB3Q9Y5G1 929 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 WIF1Q9Y5W5 379 aa10.95□□□□□ -0.66
SSBP3-214ENST00000533209 SVILO95425 2214 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 EML6Q6ZMW3 1958 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 A0A1W2PP18 115 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 PRAMEF27A3QJZ7 478 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 GMNCA6NCL1 334 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 B4DXG7 233 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 HMGN4O00479 90 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 SCO2O43819 266 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 OXSR1O95747 527 aaPredicted RBP10.94□□□□□ -0.66
SSBP3-214ENST00000533209 AK1P00568 194 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 IGHG3P01860 377 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 TBXA2RP21731 343 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 ELAVL4P26378 380 aaKnown RBP10.94□□□□□ -0.66
SSBP3-214ENST00000533209 HSF1Q00613 529 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 FUT5Q11128 374 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 UBAP2LQ14157 1087 aaKnown RBP10.94□□□□□ -0.66
SSBP3-214ENST00000533209 SLC10A1Q14973 349 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 EIF2S3LQ2VIR3 472 aaKnown RBP10.94□□□□□ -0.66
SSBP3-214ENST00000533209 ARHGAP11BQ3KRB8 267 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 SPATA21Q7Z572 469 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 FGD2Q7Z6J4 655 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 MARCH3Q86UD3 253 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 MSRB3Q8IXL7 192 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 GHDCQ8N2G8 530 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 OR1J4Q8NGS1 313 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 PNPT1Q8TCS8 783 aaKnown RBP10.94□□□□□ -0.66
SSBP3-214ENST00000533209 TSPEARQ8WU66 669 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 XAGE5Q8WWM1 108 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 SDF2Q99470 211 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 TPT1P8Q9HAU6 139 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 UBQLN4Q9NRR5 601 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 QPCTLQ9NXS2 382 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 SLC25A37Q9NYZ2 338 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 SLAMF8Q9P0V8 285 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 LIPGQ9Y5X9 500 aa10.94□□□□□ -0.66
SSBP3-214ENST00000533209 TRBV5-3A0A0A0MS03 114 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 NPIPA5A0A0B4J1W7 369 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 A0A1B0GVC2 190 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 ALG1L2C9J202 215 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 NPIPA7E9PJI5 369 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 NPIPB9F8W1W9 429 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 ZNHIT1O43257 154 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 SNX3O60493 162 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 CDC40O60508 579 aaKnown RBP eCLIP10.93□□□□□ -0.66
SSBP3-214ENST00000533209 PDE9AO76083 593 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 ZIC2O95409 532 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-214ENST00000533209 KRT75O95678 551 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 AGR2O95994 175 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 SNRPB2P08579 225 aaKnown RBP10.93□□□□□ -0.66
SSBP3-214ENST00000533209 NPIPA8P0DM63 369 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 ATP6V1C1P21283 382 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms