RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 CDH24Q86UP0 819 aa17.2■□□□□ 0.34
SSH3-209ENST00000532600 C9orf106Q8NAJ2 232 aa17.2■□□□□ 0.34
SSH3-209ENST00000532600 MBD3L2Q8NHZ7 208 aaPredicted RBP17.2■□□□□ 0.34
SSH3-209ENST00000532600 ELP4Q96EB1 424 aa17.2■□□□□ 0.34
SSH3-209ENST00000532600 TRIB1Q96RU8 372 aa17.2■□□□□ 0.34
SSH3-209ENST00000532600 TUBA1CQ9BQE3 449 aa17.2■□□□□ 0.34
SSH3-209ENST00000532600 ZNF559Q9BR84 538 aa17.2■□□□□ 0.34
SSH3-209ENST00000532600 AKTIPQ9H8T0 292 aa17.2■□□□□ 0.34
SSH3-209ENST00000532600 MEAF6Q9HAF1 191 aa17.2■□□□□ 0.34
SSH3-209ENST00000532600 MIEF1Q9NQG6 463 aa17.2■□□□□ 0.34
SSH3-209ENST00000532600 TAS2R9Q9NYW1 312 aa17.2■□□□□ 0.34
SSH3-209ENST00000532600 ITGB1BP2Q9UKP3 347 aa17.2■□□□□ 0.34
SSH3-209ENST00000532600 WBP11Q9Y2W2 641 aaKnown RBP17.2■□□□□ 0.34
SSH3-209ENST00000532600 ANKHD1Q8IWZ3 2542 aaKnown RBP17.2■□□□□ 0.34
SSH3-209ENST00000532600 SDHDO14521 159 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 FADS1O60427 444 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 ZIC3O60481 467 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 CPN1P15169 458 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 SDC1P18827 310 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 STARP49675 285 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 LHX2P50458 406 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 AGFG1P52594 562 aaKnown RBP17.19■□□□□ 0.34
SSH3-209ENST00000532600 B3GALT5-AS1P59052 145 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 GUCY1A3Q02108 690 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 GAB1Q13480 694 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 ZNF551Q7Z340 670 aaPredicted RBP17.19■□□□□ 0.34
SSH3-209ENST00000532600 OR14L1PQ8NHC6 308 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 ZPLD1Q8TCW7 415 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 NRGNQ92686 78 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 GFM2Q969S9 779 aaKnown RBP17.19■□□□□ 0.34
SSH3-209ENST00000532600 TUBGCP3Q96CW5 907 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 METTL2AQ96IZ6 378 aaKnown RBP17.19■□□□□ 0.34
SSH3-209ENST00000532600 PPP3R2Q96LZ3 170 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 CCT7Q99832 543 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 CALHM2Q9HA72 323 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 TAS2R10Q9NYW0 307 aa17.19■□□□□ 0.34
SSH3-209ENST00000532600 PCNX3Q9H6A9 2034 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 HDAC3O15379 428 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 COQ9O75208 318 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 SLITRK5O94991 958 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 BCKDHAP12694 445 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 IL12BP29460 328 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 SRD5A2P31213 254 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 EVI2BP34910 448 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 PSPHP78330 225 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 MYBPHQ13203 477 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 FBXL19-AS1Q494R0 122 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 ARFGAP2Q8N6H7 521 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 PIWIL2Q8TC59 973 aaKnown RBP17.18■□□□□ 0.34
SSH3-209ENST00000532600 CIDECQ96AQ7 238 aaPredicted RBP17.18■□□□□ 0.34
SSH3-209ENST00000532600 LMF2Q9BU23 707 aaKnown RBP17.18■□□□□ 0.34
SSH3-209ENST00000532600 C1orf50Q9BV19 199 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 WDR55Q9H6Y2 383 aaPredicted RBP17.18■□□□□ 0.34
SSH3-209ENST00000532600 ZNF629Q9UEG4 869 aaPredicted RBP17.18■□□□□ 0.34
SSH3-209ENST00000532600 BAIAP2L1Q9UHR4 511 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 OR10H1Q9Y4A9 318 aa17.18■□□□□ 0.34
SSH3-209ENST00000532600 DVL2O14641 736 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 IL2RAP01589 272 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 IGKV1D-16P01601 117 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 NTSP30990 170 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 MAP3K8P41279 467 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 ASCL1P50553 236 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 CLDN18P56856 261 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 SRYQ05066 204 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 FOXF2Q12947 444 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 CYP27C1Q4G0S4 372 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 SLC9B1Q4ZJI4 515 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 ATP6AP1LQ52LC2 224 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 HOMEZQ8IX15 550 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 ZZZ3Q8IYH5 903 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 KIRREL3Q8IZU9 778 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 FADS6Q8N9I5 356 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 CLHC1Q8NHS4 586 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 NUDT8Q8WV74 236 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 HOXB13Q92826 284 aaPredicted RBP17.17■□□□□ 0.34
SSH3-209ENST00000532600 CRIM1Q9NZV1 1036 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 JKAMPQ9P055 326 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 CBLCQ9ULV8 474 aa17.17■□□□□ 0.34
SSH3-209ENST00000532600 MRPS18CQ9Y3D5 142 aaKnown RBP17.17■□□□□ 0.34
SSH3-209ENST00000532600 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 GXYLT2A0PJZ3 443 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 AKAP10O43572 662 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 SCO2O43819 266 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 IFI6P09912 130 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 TCEA1P23193 301 aaKnown RBP17.16■□□□□ 0.34
SSH3-209ENST00000532600 EPHA3P29320 983 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 UQCRC1P31930 480 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 KRT20P35900 424 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 FRKP42685 505 aaPredicted RBP17.16■□□□□ 0.34
SSH3-209ENST00000532600 HSPB3Q12988 150 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 PDE7AQ13946 482 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 IL23RQ5VWK5 629 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 IFNEQ86WN2 208 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 FNDC5Q8NAU1 212 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 RNASE6Q93091 150 aaKnown RBP17.16■□□□□ 0.34
SSH3-209ENST00000532600 GIMAP5Q96F15 307 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 ZNF764Q96H86 408 aaPredicted RBP17.16■□□□□ 0.34
SSH3-209ENST00000532600 MAELQ96JY0 434 aaKnown RBP17.16■□□□□ 0.34
SSH3-209ENST00000532600 TSSK3Q96PN8 268 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 UCN2Q96RP3 112 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms