RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 CLDN15P56746 228 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 EEFSECP57772 596 aaKnown RBP15.19■□□□□ 0.02
CPSF1-207ENST00000531727 KEAP1Q14145 624 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 DEFB113Q30KQ7 82 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 LIPMQ5VYY2 423 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 CLEC6AQ6EIG7 209 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 DUSP19Q8WTR2 217 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 UBLCP1Q8WVY7 318 aaPredicted RBP15.19■□□□□ 0.02
CPSF1-207ENST00000531727 C1GALT1C1Q96EU7 318 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 C12orf65Q9H3J6 166 aaKnown RBP15.19■□□□□ 0.02
CPSF1-207ENST00000531727 PTGES2Q9H7Z7 377 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 C3orf14Q9HBI5 128 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 LRTM1Q9HBL6 345 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 C1orf109Q9NX04 203 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 NDRG3Q9UGV2 375 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 ZNF337Q9Y3M9 751 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 PTGDR2Q9Y5Y4 395 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 VPS13CQ709C8 3753 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 MPDZO75970 2070 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 OR2M5A3KFT3 312 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 COPEO14579 308 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 RGS14O43566 566 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 UTS2O95399 124 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 GABRA3P34903 492 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 CPOXP36551 454 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 FOXD4Q12950 439 aaPredicted RBP15.18■□□□□ 0.02
CPSF1-207ENST00000531727 HSPB3Q12988 150 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 POU4F3Q15319 338 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 GLYR1Q49A26 553 aaPredicted RBP15.18■□□□□ 0.02
CPSF1-207ENST00000531727 ZNF551Q7Z340 670 aaPredicted RBP15.18■□□□□ 0.02
CPSF1-207ENST00000531727 MARCH3Q86UD3 253 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 LRRN4CLQ8ND94 238 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 OR5M1Q8NGP8 315 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 SMPDL3BQ92485 455 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 GFM2Q969S9 779 aaKnown RBP15.18■□□□□ 0.02
CPSF1-207ENST00000531727 STARD4Q96DR4 205 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 ZNF764Q96H86 408 aaPredicted RBP15.18■□□□□ 0.02
CPSF1-207ENST00000531727 FCRL1Q96LA6 429 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 PIGQQ9BRB3 760 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 TBL1XR1Q9BZK7 514 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 EQTNQ9NQ60 294 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 TESMINQ9Y4I5 508 aa15.18■□□□□ 0.02
CPSF1-207ENST00000531727 IGLV3-32A0A0A0MS00 114 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 GXYLT2A0PJZ3 443 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 SMIM23A6NLE4 172 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 H0YC42 278 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 AZIN1O14977 448 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 TNFRSF21O75509 655 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 SMNDC1O75940 238 aaKnown RBP eCLIP15.17■□□□□ 0.02
CPSF1-207ENST00000531727 KCNH1O95259 989 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 IGKV1D-16P01601 117 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 PRPS2P11908 318 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 NEFHP12036 1026 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 KRT4P19013 534 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 GPC1P35052 558 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 RFX3P48380 749 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 PCYT1AP49585 367 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 SUCLG1P53597 346 aaKnown RBP15.17■□□□□ 0.02
CPSF1-207ENST00000531727 TPD52P55327 224 aaPredicted RBP15.17■□□□□ 0.02
CPSF1-207ENST00000531727 ADAM8P78325 824 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 C17orf67Q0P5P2 114 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 ANKRD26P1Q6NSI1 321 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 VWA1Q6PCB0 445 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 RNF165Q6ZSG1 346 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 C10orf107Q8IVU9 208 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 CNEP1R1Q8N9A8 125 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 ZFP28Q8NHY6 868 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 EPS8L3Q8TE67 593 aaKnown RBP15.17■□□□□ 0.02
CPSF1-207ENST00000531727 FIG4Q92562 907 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 HOXB13Q92826 284 aaPredicted RBP15.17■□□□□ 0.02
CPSF1-207ENST00000531727 CIDECQ96AQ7 238 aaPredicted RBP15.17■□□□□ 0.02
CPSF1-207ENST00000531727 CCT7Q99832 543 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 PINK1Q9BXM7 581 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 REEP4Q9H6H4 257 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 MID2Q9UJV3 735 aa15.17■□□□□ 0.02
CPSF1-207ENST00000531727 SETD2Q9BYW2 2564 aaPredicted RBP15.16■□□□□ 0.02
CPSF1-207ENST00000531727 A0A1W2PPR1 153 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 H3BML4 177 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 CASKO14936 926 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 SEC14L5O43304 696 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 TBX19O60806 448 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 NKX2-2O95096 273 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 ANGPTL1O95841 491 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 SDC1P18827 310 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 MAP3K8P41279 467 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 KIR2DL2P43627 348 aaPredicted RBP15.16■□□□□ 0.02
CPSF1-207ENST00000531727 CLDN20P56880 219 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 PRR5P85299 388 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 SLC18A2Q05940 514 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 FAM27E3Q08E93 113 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 PCLAFQ15004 111 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 GRAMD1BQ3KR37 738 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 VPS26BQ4G0F5 336 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 ZNF385BQ569K4 471 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 APOOLQ6UXV4 268 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 Q6ZSR9 355 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 BTLAQ7Z6A9 289 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 C4orf33Q8N1A6 199 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 OR2T11Q8NH01 316 aa15.16■□□□□ 0.02
CPSF1-207ENST00000531727 CEP70Q8NHQ1 597 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms