RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 ZAR1Q86SH2 424 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 RNF130Q86XS8 419 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 CISD2Q8N5K1 135 aaKnown RBP13.25□□□□□ -0.29
CPSF1-206ENST00000531480 COX18Q8N8Q8 333 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 OR52N2Q8NGI0 321 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 OR5M3Q8NGP4 307 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 FBXO30Q8TB52 745 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 CPT1CQ8TCG5 803 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 JADE3Q92613 823 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 MIB2Q96AX9 1013 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 EFHD2Q96C19 240 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-206ENST00000531480 TMEM41AQ96HV5 264 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 SDF2Q99470 211 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 G6PC3Q9BUM1 346 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 SAP130Q9H0E3 1048 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 ASF1BQ9NVP2 202 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 FBXO34Q9NWN3 711 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 NDE1Q9NXR1 346 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 VAPAQ9P0L0 249 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 CAPN7Q9Y6W3 813 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 PRAMEF27A3QJZ7 478 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 PRAMEF25A6NGN4 478 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 LRRC3CA6NJW4 275 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 BBIP1A8MTZ0 92 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 ICOSLGO75144 302 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 UNC5CO95185 931 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 NPPAP01160 153 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 TBXA2RP21731 343 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 PRDX6P30041 224 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 EVI2BP34910 448 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 CHI3L1P36222 383 aaPredicted RBP13.24□□□□□ -0.29
CPSF1-206ENST00000531480 DNASE1L1P49184 302 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 KHKP50053 298 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 MLLT10P55197 1068 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 GPR85P60893 370 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 FADDQ13158 208 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 COX20Q5RI15 118 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 DCST2Q5T1A1 773 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 PRAMEF20Q5VT98 475 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 FAM180AQ6UWF9 173 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 C6orf89Q6UWU4 347 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 DNAJC14Q6Y2X3 702 aaPredicted RBP13.24□□□□□ -0.29
CPSF1-206ENST00000531480 BNC2Q6ZN30 1099 aaPredicted RBP13.24□□□□□ -0.29
CPSF1-206ENST00000531480 OIT3Q8WWZ8 545 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 NR4A3Q92570 626 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 OTUB1Q96FW1 271 aaPredicted RBP13.24□□□□□ -0.29
CPSF1-206ENST00000531480 AURKBQ96GD4 344 aaPredicted RBP13.24□□□□□ -0.29
CPSF1-206ENST00000531480 TTTY12Q9BZ98 90 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 ZNF350Q9GZX5 532 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 ZDHHC11Q9H8X9 412 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 IL1RL2Q9HB29 575 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 TUBA8Q9NY65 449 aaPredicted RBP13.24□□□□□ -0.29
CPSF1-206ENST00000531480 ARMCX1Q9P291 453 aa13.24□□□□□ -0.29
CPSF1-206ENST00000531480 A0A1W2PQD3 144 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 ALG1L2C9J202 215 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 FXYD1O00168 92 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 CLIC1O00299 241 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 ANGPT2O15123 496 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 UTS2O95399 124 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 ANP32DO95626 131 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 OR12D1P0DN82 309 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 ESRRAP11474 423 aaPredicted RBP13.23□□□□□ -0.29
CPSF1-206ENST00000531480 GPX2P18283 190 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 CALB2P22676 271 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 PPIBP23284 216 aaKnown RBP13.23□□□□□ -0.29
CPSF1-206ENST00000531480 MST1P26927 711 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 ANXA11P50995 505 aaKnown RBP13.23□□□□□ -0.29
CPSF1-206ENST00000531480 PMP22Q01453 160 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 TLE1Q04724 770 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 STX5Q13190 355 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 RGNQ15493 299 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 MAPK11Q15759 364 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 RUNDC3AQ59EK9 446 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 CCNJQ5T5M9 372 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 TNFAIP8L2Q6P589 184 aaPredicted RBP13.23□□□□□ -0.29
CPSF1-206ENST00000531480 FIGNL1Q6PIW4 674 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 TREML1Q86YW5 311 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 OR4C3Q8NH37 302 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 RP9Q8TA86 221 aaKnown RBP13.23□□□□□ -0.29
CPSF1-206ENST00000531480 NSL1Q96IY1 281 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 DOHHQ9BU89 302 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 OSBPL11Q9BXB4 747 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 UBQLN3Q9H347 655 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 RAD21L1Q9H4I0 556 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 METTL7AQ9H8H3 244 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 ZFP64Q9NPA5 681 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 POLE3Q9NRF9 147 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 UBQLN4Q9NRR5 601 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 PLSCR2Q9NRY7 297 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 AGPAT4Q9NRZ5 378 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 EXD2Q9NVH0 621 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 THUMPD1Q9NXG2 353 aaKnown RBP13.23□□□□□ -0.29
CPSF1-206ENST00000531480 QPCTLQ9NXS2 382 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 FLRT3Q9NZU0 649 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 LIPT1Q9Y234 373 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 WIF1Q9Y5W5 379 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.23□□□□□ -0.29
CPSF1-206ENST00000531480 NBASA2RRP1 2371 aa13.23□□□□□ -0.29
CPSF1-206ENST00000531480 SETXQ7Z333 2677 aaKnown RBP13.23□□□□□ -0.29
CPSF1-206ENST00000531480 UBR5O95071 2799 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms