RNA–Protein interactions for RNA: ENST00000530786.5

BDNF-214, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-214ENST00000530786 ITGA3P26006 1051 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 ZFP36L2P47974 494 aaKnown RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 ATP12AP54707 1039 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 AQP4P55087 323 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 PRICKLE4Q2TBC4 344 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 ARHGAP11BQ3KRB8 267 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 ZNF628Q5EBL2 1059 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 CEP78Q5JTW2 689 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 C8orf82Q6P1X6 216 aaPredicted RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 OPN5Q6U736 354 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 B3GNT8Q7Z7M8 397 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 ZNF605Q86T29 641 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 PTOV1Q86YD1 416 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 CLEC1AQ8NC01 280 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 ZNF248Q8NDW4 579 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 B3GNT7Q8NFL0 401 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 C16orf52Q8NHV5 167 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 GRHL3Q8TE85 626 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 GTPBP3Q969Y2 492 aaKnown RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 EFHD2Q96C19 240 aaPredicted RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 JSRP1Q96MG2 331 aaPredicted RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 ZNF681Q96N22 645 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 RDH12Q96NR8 316 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 ZNF559Q9BR84 538 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 ITPAQ9BY32 194 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 POLR2J3Q9H1A7 115 aaKnown RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 APMAPQ9HDC9 416 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 SLC52A3Q9NQ40 469 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 NECTIN3Q9NQS3 549 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 SERINC1Q9NRX5 453 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 EXO1Q9UQ84 846 aaKnown RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 POFUT2Q9Y2G5 429 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 MED31Q9Y3C7 131 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 RIF1Q5UIP0 2472 aaKnown RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 OR2W5A6NFC9 320 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 HCRTR1O43613 425 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 SCO2O43819 266 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 TNFAIP8O95379 198 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 TFPTP0C1Z6 253 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 PGCP20142 388 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 PRKAR1BP31321 381 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 GALNSP34059 522 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 RPL4P36578 427 aaKnown RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 DCTP40126 519 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 PCYT1AP49585 367 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 KCNJ10P78508 379 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 NKG7Q16617 165 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 ABHD17BQ5VST6 288 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 POMZP3Q6PJE2 187 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 PRR22Q8IZ63 422 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 NLGN4XQ8N0W4 816 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 GATSQ8NAP1 163 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 PLPP5Q8NEB5 264 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 NLGN4YQ8NFZ3 816 aaPredicted RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 ANKRD9Q96BM1 317 aaPredicted RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 SH3YL1Q96HL8 342 aaPredicted RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 SDF2Q99470 211 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 ADI1Q9BV57 179 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 PAPOLBQ9NRJ5 636 aaKnown RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 AGPAT4Q9NRZ5 378 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 SIRT3Q9NTG7 399 aaPredicted RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 RHCGQ9UBD6 479 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 MGAT4BQ9UQ53 548 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 ZNF443Q9Y2A4 671 aaPredicted RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 LRRK1Q38SD2 2015 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 C4orf51C9J302 202 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 FAAHO00519 579 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 ACOX3O15254 700 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 TBX6O95947 436 aaPredicted RBP6.88□□□□□ -1.31
BDNF-214ENST00000530786 POU2F1P14859 743 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 TNFRSF1BP20333 461 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 KCNJ5P48544 419 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 PDX1P52945 283 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 MPEG1Q2M385 716 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 C1QTNF12Q5T7M4 302 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 TOR1AIP2Q8NFQ8 470 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 PSMA8Q8TAA3 256 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 DIO2Q92813 273 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 TAMM41Q96BW9 452 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 FER1L6-AS2Q96M78 137 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 HS6ST2Q96MM7 605 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 Q96MT0 163 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 EPYCQ99645 322 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 HPF1Q9NWY4 346 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 MYRFQ9Y2G1 1151 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 TPRKBQ9Y3C4 175 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 B3GALT1Q9Y5Z6 326 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 IGHV3-20A0A0C4DH32 117 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 CDC14CA4D256 554 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 M0R3H8 397 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 WWP2O00308 870 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 OXSR1O95747 527 aaPredicted RBP6.88□□□□□ -1.31
BDNF-214ENST00000530786 PABPC4LP0CB38 370 aaKnown RBP6.88□□□□□ -1.31
BDNF-214ENST00000530786 GIMD1P0DJR0 217 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 CYP4B1P13584 511 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 DLSTP36957 453 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 FRKP42685 505 aaPredicted RBP6.88□□□□□ -1.31
BDNF-214ENST00000530786 SLC16A1P53985 500 aa6.88□□□□□ -1.31
BDNF-214ENST00000530786 TOP3AQ13472 1001 aaPredicted RBP6.88□□□□□ -1.31
BDNF-214ENST00000530786 NCF4Q15080 339 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms