RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 DSN1Q9H410 356 aa9.33□□□□□ -0.92
COPB1-207ENST00000529866 PFDN4Q9NQP4 134 aa9.33□□□□□ -0.92
COPB1-207ENST00000529866 CPSF2Q9P2I0 782 aaKnown RBP9.33□□□□□ -0.92
COPB1-207ENST00000529866 CLEC4AQ9UMR7 237 aa9.33□□□□□ -0.92
COPB1-207ENST00000529866 GPR55Q9Y2T6 319 aaPredicted RBP9.33□□□□□ -0.92
COPB1-207ENST00000529866 ACOT9Q9Y305 439 aa9.33□□□□□ -0.92
COPB1-207ENST00000529866 RNF11Q9Y3C5 154 aa9.33□□□□□ -0.92
COPB1-207ENST00000529866 OR10H1Q9Y4A9 318 aa9.33□□□□□ -0.92
COPB1-207ENST00000529866 PCDHA9Q9Y5H5 950 aa9.33□□□□□ -0.92
COPB1-207ENST00000529866 ZNF780BQ9Y6R6 833 aa9.33□□□□□ -0.92
COPB1-207ENST00000529866 SVEP1Q4LDE5 3571 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 IGHV4-30-2A0A087WSY4 118 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 FAM234BA2RU67 622 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 EIF1AYO14602 144 aaKnown RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 SCO2O43819 266 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 SSX4O60224 188 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 TSPAN2O60636 221 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 KLHL2O95198 593 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 THBS1P07996 1170 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 GFAPP14136 432 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 SLC25A16P16260 332 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 PCSK2P16519 638 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 IL32P24001 234 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 ECHS1P30084 290 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 ARL1P40616 181 aaPredicted RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 MAGEA12P43365 314 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 SERPINB8P50452 374 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 PNLIPRP2P54317 469 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 GAS1P54826 345 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 ALDH18A1P54886 795 aaKnown RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 LOXL1Q08397 574 aaPredicted RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 STX5Q13190 355 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 GTF2H2Q13888 395 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 CTU2Q2VPK5 515 aaKnown RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 TRMT12Q53H54 448 aaKnown RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 LIPNQ5VXI9 398 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 CYB5R2Q6BCY4 276 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 GTF2H2CQ6P1K8 395 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 DNAJC14Q6Y2X3 702 aaPredicted RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 NOA1Q8NC60 698 aaKnown RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 OR2M3Q8NG83 312 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 LILRB1Q8NHL6 650 aaPredicted RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 RHEBL1Q8TAI7 183 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 S100PBPQ96BU1 408 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 EFHD2Q96C19 240 aaPredicted RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 C1GALT1C1Q96EU7 318 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 USB1Q9BQ65 265 aaKnown RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 TRAF4Q9BUZ4 470 aaPredicted RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 GRIP2Q9C0E4 1043 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 VPS11Q9H270 941 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 CDC42EP4Q9H3Q1 356 aaKnown RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 ACSS3Q9H6R3 686 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 DMGDHQ9UI17 866 aaKnown RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 GDF2Q9UK05 429 aaPredicted RBP9.32□□□□□ -0.92
COPB1-207ENST00000529866 ABCG2Q9UNQ0 655 aa9.32□□□□□ -0.92
COPB1-207ENST00000529866 CCDC189A1A4V9 331 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 NDUFS7O75251 213 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 SYNGR4O95473 234 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 TUBBP07437 444 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 CT45A8P0DMV1 189 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 CT45A9P0DMV2 189 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 HNF1AP20823 631 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 SLC6A8P48029 635 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 CLK3P49761 638 aaKnown RBP9.31□□□□□ -0.92
COPB1-207ENST00000529866 CORO7P57737 925 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 MRPS35P82673 323 aaKnown RBP9.31□□□□□ -0.92
COPB1-207ENST00000529866 TRAF3Q13114 568 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 ACAP2Q15057 778 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 LTB4RQ15722 352 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 PGGHGQ32M88 737 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 GLYR1Q49A26 553 aaPredicted RBP9.31□□□□□ -0.92
COPB1-207ENST00000529866 CT45A2Q5DJT8 189 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 TTC19Q6DKK2 380 aaPredicted RBP9.31□□□□□ -0.92
COPB1-207ENST00000529866 GTF2IRD2BQ6EKJ0 949 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 GTF2IRD2Q86UP8 949 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 DTX2Q86UW9 622 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 SAMD14Q8IZD0 417 aaPredicted RBP9.31□□□□□ -0.92
COPB1-207ENST00000529866 PTGR2Q8N8N7 351 aaPredicted RBP9.31□□□□□ -0.92
COPB1-207ENST00000529866 L3MBTL4Q8NA19 623 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 KBTBD8Q8NFY9 601 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 OR10H5Q8NGA6 315 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 OR5M1Q8NGP8 315 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 UHMK1Q8TAS1 419 aaKnown RBP9.31□□□□□ -0.92
COPB1-207ENST00000529866 ZNF675Q8TD23 568 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 TRPC4APQ8TEL6 797 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 HSD17B8Q92506 261 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 ANP32BQ92688 251 aaKnown RBP9.31□□□□□ -0.92
COPB1-207ENST00000529866 PHF21BQ96EK2 531 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 C16orf45Q96MC5 204 aaPredicted RBP9.31□□□□□ -0.92
COPB1-207ENST00000529866 VSTM2LQ96N03 204 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 MRPL1Q9BYD6 325 aaKnown RBP9.31□□□□□ -0.92
COPB1-207ENST00000529866 POTEKPQ9BYX7 375 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 TRIM2Q9C040 744 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 IPPKQ9H8X2 491 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 MED11Q9P086 117 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 SENP1Q9P0U3 644 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 XPR1Q9UBH6 696 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 CES1P1Q9UKY3 287 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 KCNS2Q9ULS6 477 aa9.31□□□□□ -0.92
COPB1-207ENST00000529866 TNPO3Q9Y5L0 923 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms