RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 POLR3GO15318 223 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 EDF1O60869 148 aaKnown RBP11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 CBR3O75828 277 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 TRAPPC6AO75865 159 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 UTS2O95399 124 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 IL6P05231 212 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 TPOP07202 933 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 KRT16P08779 473 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 UQCRC2P22695 453 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 LCN1P31025 176 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 SOAT1P35610 550 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 ZFP36L2P47974 494 aaKnown RBP11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 MRPL19P49406 292 aaKnown RBP11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 MAN2A2P49641 1150 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 POU6F2P78424 691 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 FIGNL1Q6PIW4 674 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 PLCZ1Q86YW0 608 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 CLEC4FQ8N1N0 589 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 MIER2Q8N344 545 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 COX18Q8N8Q8 333 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 NEIL3Q8TAT5 605 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 ADAMTS15Q8TE58 950 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 CDS1Q92903 461 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 PSMG3-AS1Q96PY0 264 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 OR52E6Q96RD3 313 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 SLC6A15Q9H2J7 730 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 EXO5Q9H790 373 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 MED4Q9NPJ6 270 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 PCDHGB3Q9Y5G1 929 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 DIDO1Q9BTC0 2240 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 DOPEY2Q9Y3R5 2298 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 RNF103-CHMP3A0A140T963 221 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 BCKDKO14874 412 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 NGFRP08138 427 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 ENDOUP21128 410 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 MATN1P21941 496 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 TRPC1P48995 793 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 CLK3P49761 638 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 LRRC74AQ0VAA2 488 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 TOMM20Q15388 145 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 GRAMD1BQ3KR37 738 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 GXYLT1Q4G148 440 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 EMC4Q5J8M3 183 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 CCNJQ5T5M9 372 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 MTFR2Q6P444 385 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 APOOLQ6UXV4 268 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 ZAR1Q86SH2 424 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 GALNT10Q86SR1 603 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 CD163Q86VB7 1156 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 OR4C3Q8NH37 302 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 MIPOL1Q8TD10 442 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 STON2Q8WXE9 905 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 SARAFQ96BY9 339 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 CHMP6Q96FZ7 201 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 OR7D2Q96RA2 312 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 G6PC3Q9BUM1 346 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 RTN4RQ9BZR6 473 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 SERHL2Q9H4I8 314 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 SERHLQ9NQF3 203 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 SDHAF3Q9NRP4 125 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 FBXO34Q9NWN3 711 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 SPRR3Q9UBC9 169 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 SUCOQ9UBS9 1254 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 MEMO1Q9Y316 297 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 KCNE3Q9Y6H6 103 aa11.55□□□□□ -0.56
CCDC90B-216ENST00000529856 LRRK2Q5S007 2527 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 FAM234BA2RU67 622 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 CCDC154A6NI56 674 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 DUXAA6NLW8 204 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 B4DXG7 233 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 E9PLN8 166 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 SCO2O43819 266 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 ZG16O60844 167 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 ESRRAP11474 423 aaPredicted RBP11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 TBXA2RP21731 343 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 POLR2JP52435 117 aaKnown RBP11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 RPS26P62854 115 aaKnown RBP11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 EIPR1Q53HC9 387 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 WIPI1Q5MNZ9 446 aaPredicted RBP11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 SAXO2Q658L1 398 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 OR5M10Q6IEU7 315 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 MARCH3Q86UD3 253 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 FAM83FQ8NEG4 500 aaPredicted RBP11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 OR5D16Q8NGK9 328 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 OR9I1Q8NGQ6 314 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 DUSP19Q8WTR2 217 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 NEURL3Q96EH8 262 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 THOC1Q96FV9 657 aaKnown RBP11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 CCDC120Q96HB5 630 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 SLC35G5Q96KT7 338 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 PANX1Q96RD7 426 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 VKORC1Q9BQB6 163 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 SLC35A5Q9BS91 424 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 INPP5KQ9BT40 448 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 TBL1XR1Q9BZK7 514 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 OR2B2Q9GZK3 357 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 TP63Q9H3D4 680 aaPredicted RBP11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 PNPLA3Q9NST1 481 aa11.54□□□□□ -0.56
CCDC90B-216ENST00000529856 PPP4R1LQ9P1A2 415 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms