RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 FAM173AQ9BQD7 235 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 GPATCH1Q9BRR8 931 aaKnown RBP7.31□□□□□ -1.24
SSBP3-211ENST00000528787 ZNF350Q9GZX5 532 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 ARL8BQ9NVJ2 186 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 SLC25A37Q9NYZ2 338 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 KLRF1Q9NZS2 232 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.31□□□□□ -1.24
SSBP3-211ENST00000528787 TMEM181Q9P2C4 612 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 SAMD4AQ9UPU9 718 aaKnown RBP7.31□□□□□ -1.24
SSBP3-211ENST00000528787 EXPH5Q8NEV8 1989 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 PTPRQQ9UMZ3 2332 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 MED13Q9UHV7 2174 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 AKAP13Q12802 2813 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 PRAMEF25A6NGN4 478 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 ALG1L2C9J202 215 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 LINC01387J3KSC0 135 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 GTPBP1O00178 669 aaKnown RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 TAF4O00268 1085 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 NDUFB5O43674 189 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 KIAA0513O60268 411 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 EIF4E2O60573 245 aaKnown RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 TSPAN2O60636 221 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 TNFRSF21O75509 655 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 SLC25A12O75746 678 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 CIB2O75838 187 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 BCHEP06276 602 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 C8BP07358 591 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 TFPTP0C1Z6 253 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 ACP2P11117 423 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 HOXB9P17482 250 aaPredicted RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 WT1P19544 449 aaPredicted RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 CNR1P21554 472 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 ME2P23368 584 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 PRKAR1BP31321 381 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 EVI2BP34910 448 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 SOX3P41225 446 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 RFX3P48380 749 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 MASP1P48740 699 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 MAN2A2P49641 1150 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 TNFSF10P50591 281 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 MAP2K6P52564 334 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 SLC7A2P52569 658 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 CORO7P57737 925 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 FOXL2P58012 376 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 KCNJ2P63252 427 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 LIPEQ05469 1076 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 TRAP1Q12931 704 aaKnown RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 TUBA3CQ13748 450 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 ZNF169Q14929 603 aaPredicted RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 SF3B4Q15427 424 aaKnown RBP eCLIP7.3□□□□□ -1.242e-6■■■□□ 18.7
SSBP3-211ENST00000528787 ZNF791Q3KP31 576 aaPredicted RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 EXOSC6Q5RKV6 272 aaKnown RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 SLC25A25Q6KCM7 469 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 C8orf82Q6P1X6 216 aaPredicted RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 TUBA3EQ6PEY2 450 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 IL20RBQ6UXL0 311 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 LINC00696Q6ZRV3 163 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 ASB18Q6ZVZ8 466 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 ZNF550Q7Z398 422 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 SLC15A3Q8IY34 581 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 MICU2Q8IYU8 434 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 KIF2BQ8N4N8 673 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 TEX19Q8NA77 164 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 PSD4Q8NDX1 1056 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 OR52E4Q8NGH9 312 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 OR5D16Q8NGK9 328 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 PNPT1Q8TCS8 783 aaKnown RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 SLC38A5Q8WUX1 472 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 TMEM234Q8WY98 164 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 ZNF597Q96LX8 424 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 ADOQ96SZ5 270 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 CDRT15Q96T59 188 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 TREX2Q9BQ50 279 aaPredicted RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 YIPF4Q9BSR8 244 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 OSBPL11Q9BXB4 747 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 POLR2J2Q9GZM3 115 aaKnown RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 SAP130Q9H0E3 1048 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 POLR2J3Q9H1A7 115 aaKnown RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 SLC25A18Q9H1K4 315 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 YY1AP1Q9H869 796 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 ZBTB20Q9HC78 741 aaPredicted RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 QPCTLQ9NXS2 382 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 PPP4R1LQ9P1A2 415 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 SEC14L3Q9UDX4 400 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 ANAPC2Q9UJX6 822 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 ZNF223Q9UK11 482 aaPredicted RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 B3GNT3Q9Y2A9 372 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 SLC9A8Q9Y2E8 581 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 DTNAQ9Y4J8 743 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 ACACBO00763 2458 aa7.3□□□□□ -1.24
SSBP3-211ENST00000528787 TPRP12270 2363 aaKnown RBP7.3□□□□□ -1.24
SSBP3-211ENST00000528787 CNTRLQ7Z7A1 2325 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 A0A087WZY1 265 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 AGAP5A6NIR3 686 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 FXYD1O00168 92 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 SUV39H1O43463 412 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 NME2P1O60361 137 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 DNAJB5O75953 348 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 PGM3O95394 542 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms