RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 LILRB1Q8NHL6 650 aaPredicted RBP16.85■□□□□ 0.29
LTBP3-210ENST00000528516 FIBINQ8TAL6 211 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 C16orf78Q8WTQ4 265 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 HMGB4Q8WW32 186 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 KIAA1143Q96AT1 154 aaPredicted RBP16.85■□□□□ 0.29
LTBP3-210ENST00000528516 WASH6PQ9NQA3 447 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 MRPL15Q9P015 296 aaKnown RBP16.85■□□□□ 0.29
LTBP3-210ENST00000528516 TRIOBPQ9H2D6 2365 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 RAB36O95755 333 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 ACSM4P0C7M7 580 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 CMPK1P30085 196 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 C17orf107Q6ZR85 190 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 LNX2Q8N448 690 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 MCHR1Q99705 422 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 SLC6A16Q9GZN6 736 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 OR51I1Q9H343 314 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 SDHAF2Q9NX18 166 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 EXO1Q9UQ84 846 aaKnown RBP16.85■□□□□ 0.29
LTBP3-210ENST00000528516 PSMD9O00233 223 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 PPM1BO75688 479 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 DHCR24Q15392 516 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 CLLU1Q5K131 121 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 MEDAGQ5VYS4 303 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 DUSP18Q8NEJ0 188 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 OR4K5Q8NGD3 323 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 SECISBP2Q96T21 854 aaKnown RBP16.85■□□□□ 0.29
LTBP3-210ENST00000528516 ZNF416Q9BWM5 594 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 SIP14410 1827 aa16.85■□□□□ 0.29
LTBP3-210ENST00000528516 NPIPA5A0A0B4J1W7 369 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 NPIPA7E9PJI5 369 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 CSN2P05814 226 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 NPIPA8P0DM63 369 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 F8A1P23610 371 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 NDUFAF6Q330K2 333 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 CNKSR3Q6P9H4 555 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 WASH2PQ6VEQ5 465 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 OR11H4Q8NGC9 324 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 RC3H2Q9HBD1 1191 aaKnown RBP16.84■□□□□ 0.29
LTBP3-210ENST00000528516 TMEM27Q9HBJ8 222 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 ZFR2Q9UPR6 939 aaKnown RBP16.84■□□□□ 0.29
LTBP3-210ENST00000528516 WDR45Q9Y484 360 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 FAM25EA8MYX2 175 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 GABRB1P18505 474 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 TOMM20Q15388 145 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 GPR139Q6DWJ6 353 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 NANOGP1Q8N7R0 232 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 SAMD12Q8N8I0 201 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 BBS10Q8TAM1 723 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 ASB11Q8WXH4 323 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 GPR137Q96N19 417 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 KXD1Q9BQD3 176 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 THAP7Q9BT49 309 aaPredicted RBP16.84■□□□□ 0.29
LTBP3-210ENST00000528516 TNFRSF10DQ9UBN6 386 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 ZDBF2Q9HCK1 2354 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 hCG_1807616A0A1W2PRN6 198 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 HIDE1A8MVS5 230 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 CXCL3P19876 107 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 NDUFAF5Q5TEU4 345 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 TMEFF1Q8IYR6 380 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 MS4A15Q8N5U1 240 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 LINC01599Q8WXQ3 324 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 MSLNLQ96KJ4 702 aa16.84■□□□□ 0.29
LTBP3-210ENST00000528516 CUEDC1Q9NWM3 386 aaPredicted RBP16.84■□□□□ 0.29
LTBP3-210ENST00000528516 CNOT1A5YKK6 2376 aaKnown RBP16.84■□□□□ 0.29
LTBP3-210ENST00000528516 HIST1H2ABP04908 130 aa16.83■□□□□ 0.29
LTBP3-210ENST00000528516 RRASP10301 218 aa16.83■□□□□ 0.29
LTBP3-210ENST00000528516 PTPN6P29350 595 aa16.83■□□□□ 0.29
LTBP3-210ENST00000528516 SRP9P49458 86 aaKnown RBP16.83■□□□□ 0.29
LTBP3-210ENST00000528516 PDGFRLQ15198 375 aa16.83■□□□□ 0.29
LTBP3-210ENST00000528516 TCEAL5Q5H9L2 206 aa16.83■□□□□ 0.29
LTBP3-210ENST00000528516 HIST3H2AQ7L7L0 130 aa16.83■□□□□ 0.29
LTBP3-210ENST00000528516 GPR155Q7Z3F1 870 aa16.83■□□□□ 0.29
LTBP3-210ENST00000528516 OR8J1Q8NGP2 316 aa16.83■□□□□ 0.29
LTBP3-210ENST00000528516 HIST1H2ACQ93077 130 aa16.83■□□□□ 0.29
LTBP3-210ENST00000528516 SCPEP1Q9HB40 452 aa16.83■□□□□ 0.29
LTBP3-210ENST00000528516 CSNK1G3Q9Y6M4 447 aa16.83■□□□□ 0.29
LTBP3-210ENST00000528516 CDH10Q9Y6N8 788 aa16.83■□□□□ 0.29
LTBP3-210ENST00000528516 RIIAD1A6NNX1 92 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 L7N2F9 121 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 BET1O15155 118 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 NAA10P41227 235 aaPredicted RBP16.83■□□□□ 0.28
LTBP3-210ENST00000528516 SYPL1Q16563 259 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 PRPF38BQ5VTL8 546 aaKnown RBP16.83■□□□□ 0.28
LTBP3-210ENST00000528516 AFMIDQ63HM1 303 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 TOMM5Q8N4H5 51 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 CACNG6Q9BXT2 260 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 NT5DC2Q9H857 520 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 ELL3Q9HB65 397 aaPredicted RBP16.83■□□□□ 0.28
LTBP3-210ENST00000528516 BRCA2P51587 3418 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 CFDP00746 253 aaPredicted RBP16.83■□□□□ 0.28
LTBP3-210ENST00000528516 IGLV3-25P01717 112 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 HOXD4P09016 255 aaPredicted RBP16.83■□□□□ 0.28
LTBP3-210ENST00000528516 GIFP27352 417 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 ETV5P41161 510 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 SOX2P48431 317 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 TUSC1Q2TAM9 212 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 DCUN1D3Q8IWE4 304 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 UCN3Q969E3 161 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 MLXQ9UH92 298 aa16.83■□□□□ 0.28
LTBP3-210ENST00000528516 LOC285556D6RIA3 1793 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms