RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 TNFRSF10DQ9UBN6 386 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 BAIAP2L1Q9UHR4 511 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 ATP6V1HQ9UI12 483 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 EDARQ9UNE0 448 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 SLC6A5Q9Y345 797 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 A0A1W2PRB8 838 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 NKX2-6A6NCS4 301 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 FAM90A27PA6NNH2 459 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 NKX2-2O95096 273 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 SERPINE1P05121 402 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 KRT16P08779 473 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 ALOX5P09917 674 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 PEPDP12955 493 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 HPGDP15428 266 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 HOXB4P17483 251 aaPredicted RBP8.73□□□□□ -1.01
CHD7-208ENST00000528280 IGFBP2P18065 325 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 CTSSP25774 331 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 DPP4P27487 766 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 EVI2BP34910 448 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 ETV4P43268 484 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 PRKAG1P54619 331 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 GAS1P54826 345 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 CBX1P83916 185 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 EMX2Q04743 252 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 TFF3Q07654 80 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 ZNF844Q08AG5 666 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 HSPB3Q12988 150 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 TESK1Q15569 626 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 PRSS53Q2L4Q9 553 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 XKR7Q5GH72 579 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 C6orf136Q5SQH8 315 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 ARSKQ6UWY0 536 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 NPSR1Q6W5P4 371 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 ZNF551Q7Z340 670 aaPredicted RBP8.73□□□□□ -1.01
CHD7-208ENST00000528280 EXOC3L1Q86VI1 746 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 KIF18BQ86Y91 864 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 LRRC34Q8IZ02 419 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 ZNF295-AS1Q8N0V1 137 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 RPRMLQ8N4K4 120 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 FNDC5Q8NAU1 212 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 OR4N2Q8NGD1 307 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 OR5P2Q8WZ92 322 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 HOXB13Q92826 284 aaPredicted RBP8.73□□□□□ -1.01
CHD7-208ENST00000528280 WNT2BQ93097 391 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 MOAP1Q96BY2 351 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 EFHD2Q96C19 240 aaPredicted RBP8.73□□□□□ -1.01
CHD7-208ENST00000528280 TUBGCP3Q96CW5 907 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 COQ8BQ96D53 544 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 PGM2Q96G03 612 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 PKNOX2Q96KN3 472 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 TRIB1Q96RU8 372 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 ZNF559Q9BR84 538 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 MECRQ9BV79 373 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 TBL1XR1Q9BZK7 514 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 HOXD1Q9GZZ0 328 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 CENPHQ9H3R5 247 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 KCNK9Q9NPC2 374 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 ZDHHC2Q9UIJ5 367 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 DKKL1Q9UK85 242 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 RAP2CQ9Y3L5 183 aa8.73□□□□□ -1.01
CHD7-208ENST00000528280 PKDREJQ9NTG1 2253 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 MBD3L4A6NDZ8 208 aaPredicted RBP8.72□□□□□ -1.01
CHD7-208ENST00000528280 MBD3L3A6NE82 208 aaPredicted RBP8.72□□□□□ -1.01
CHD7-208ENST00000528280 MBD3L5A6NJ08 208 aaPredicted RBP8.72□□□□□ -1.01
CHD7-208ENST00000528280 H0Y3Z8 333 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 SCAMP2O15127 329 aaKnown RBP8.72□□□□□ -1.01
CHD7-208ENST00000528280 ZIC3O60481 467 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 DIAPH2O60879 1101 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 RCBTB2O95199 551 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 NGFRP08138 427 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 ADH7P40394 386 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 MAP3K8P41279 467 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 ASCL1P50553 236 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 RPL14P50914 215 aaKnown RBP8.72□□□□□ -1.01
CHD7-208ENST00000528280 DIO3P55073 304 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 GFRA1P56159 465 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 ABCE1P61221 599 aaKnown RBP8.72□□□□□ -1.01
CHD7-208ENST00000528280 OCRLQ01968 901 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 TLE4Q04727 773 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 STX3Q13277 289 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 TP53BP2Q13625 1128 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 FBXL19-AS1Q494R0 122 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 CEP85LQ5SZL2 805 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 IL23RQ5VWK5 629 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 FAM219BQ5XKK7 198 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 DESI1Q6ICB0 168 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 OR2A2Q6IF42 318 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 SPNS3Q6ZMD2 512 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 ZCCHC23Q6ZST2 131 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 HDXQ7Z353 690 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 WDR53Q7Z5U6 358 aaPredicted RBP8.72□□□□□ -1.01
CHD7-208ENST00000528280 MISPQ8IVT2 679 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 MEIOBQ8N635 442 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 FADS6Q8N9I5 356 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 VPS37AQ8NEZ2 397 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 TNIP2Q8NFZ5 429 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 MBD3L2Q8NHZ7 208 aaPredicted RBP8.72□□□□□ -1.01
CHD7-208ENST00000528280 DUSP19Q8WTR2 217 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 SLC9A6Q92581 669 aa8.72□□□□□ -1.01
CHD7-208ENST00000528280 RNASE6Q93091 150 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms