RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 CDC42P60953 191 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 EEF1A1P68104 462 aaKnown RBP13.18□□□□□ -0.3
CHEK1-210ENST00000528276 ELAVL1Q15717 326 aaKnown RBP13.18□□□□□ -0.3
CHEK1-210ENST00000528276 PROX2Q3B8N5 592 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 ENTPD8Q5MY95 495 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 PODNL1Q6PEZ8 512 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 PPP1R3BQ86XI6 285 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 P3H2Q8IVL5 708 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 FAM81AQ8TBF8 368 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 ADAMTS16Q8TE57 1224 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 DAZLQ92904 295 aaKnown RBP13.18□□□□□ -0.3
CHEK1-210ENST00000528276 TSLPQ969D9 159 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 LOXL4Q96JB6 756 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 KRCC1Q9NPI7 259 aaPredicted RBP13.18□□□□□ -0.3
CHEK1-210ENST00000528276 RASSF1Q9NS23 344 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 FBXO34Q9NWN3 711 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 COPS7AQ9UBW8 275 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 FTSJ1Q9UET6 329 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 CLDN16Q9Y5I7 305 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 SNX5Q9Y5X3 404 aa13.18□□□□□ -0.3
CHEK1-210ENST00000528276 NPIPA5A0A0B4J1W7 369 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 CLDN24A6NM45 220 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 NPIPA7E9PJI5 369 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 H3BN98 237 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 LDOC1O95751 146 aaPredicted RBP13.17□□□□□ -0.3
CHEK1-210ENST00000528276 LINGO3P0C6S8 592 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 NPIPA8P0DM63 369 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 CRHBPP24387 322 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 EPHA2P29317 976 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 PSMD4P55036 377 aaKnown RBP13.17□□□□□ -0.3
CHEK1-210ENST00000528276 CDK5R2Q13319 367 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 SEC23BQ15437 767 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 NPTX1Q15818 432 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 NADK2Q4G0N4 442 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 MRPL2Q5T653 305 aaKnown RBP13.17□□□□□ -0.3
CHEK1-210ENST00000528276 BROXQ5VW32 411 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 HLA-DQA1Q5Y7H0 255 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 ZNF730Q6ZMV8 503 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 OR4K5Q8NGD3 323 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 RNF217Q8TC41 542 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 RHBDD1Q8TEB9 315 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 PTPMT1Q8WUK0 201 aaPredicted RBP13.17□□□□□ -0.3
CHEK1-210ENST00000528276 HOXB13Q92826 284 aaPredicted RBP13.17□□□□□ -0.3
CHEK1-210ENST00000528276 PRR14Q9BWN1 585 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 POLR2J3Q9H1A7 115 aaKnown RBP13.17□□□□□ -0.3
CHEK1-210ENST00000528276 ANKRD19PQ9H560 264 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 EVA1AQ9H8M9 152 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 CBLCQ9ULV8 474 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 TPRKBQ9Y3C4 175 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 PCDHGA5Q9Y5G8 931 aa13.17□□□□□ -0.3
CHEK1-210ENST00000528276 PTGES3LE9PB15 166 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 OR5F1O95221 314 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 GUSBP08236 651 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 CCDC159P0C7I6 412 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 OSMP13725 252 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 HPGDP15428 266 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 FUT4P22083 530 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 GGT2P36268 569 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 DCDP81605 110 aaKnown RBP13.16□□□□□ -0.3
CHEK1-210ENST00000528276 HOXC5Q00444 222 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 COX10Q12887 443 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 NNATQ16517 81 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 MAPK14Q16539 360 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 DECR1Q16698 335 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 ZSWIM7Q19AV6 140 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 CTU2Q2VPK5 515 aaKnown RBP13.16□□□□□ -0.3
CHEK1-210ENST00000528276 ZNF770Q6IQ21 691 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-210ENST00000528276 KLHL17Q6TDP4 642 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 BPHLQ86WA6 291 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-210ENST00000528276 ZNF615Q8N8J6 731 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 OR4N2Q8NGD1 307 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 OR14A16Q8NHC5 309 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 CNIH3Q8TBE1 160 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 SLC46A1Q96NT5 459 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 PITX2Q99697 317 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 ITPAQ9BY32 194 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 POLR2J2Q9GZM3 115 aaKnown RBP13.16□□□□□ -0.3
CHEK1-210ENST00000528276 MRTO4Q9UKD2 239 aaKnown RBP13.16□□□□□ -0.3
CHEK1-210ENST00000528276 DTX4Q9Y2E6 619 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 IGKV3D-11A0A0A0MRZ8 115 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 TCRBV16S1A1N1A0A5B0 115 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 D6RAR5 112 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 POLR1CO15160 346 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-210ENST00000528276 HYAL3O43820 417 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-210ENST00000528276 HEXBP07686 556 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 CT45A8P0DMV1 189 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 CT45A9P0DMV2 189 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 GSTM3P21266 225 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 RPS4Y1P22090 263 aaKnown RBP13.16□□□□□ -0.3
CHEK1-210ENST00000528276 CRISP1P54107 249 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 GABARAPL2P60520 117 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 RHAGQ02094 409 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 TRA2AQ13595 282 aaKnown RBP eCLIP13.16□□□□□ -0.3
CHEK1-210ENST00000528276 MAD2L1BPQ15013 274 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-210ENST00000528276 PTGES3Q15185 160 aaKnown RBP13.16□□□□□ -0.3
CHEK1-210ENST00000528276 NKAIN1Q4KMZ8 207 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 CT45A2Q5DJT8 189 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 PDZK1Q5T2W1 519 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 PWWP2BQ6NUJ5 590 aa13.16□□□□□ -0.3
CHEK1-210ENST00000528276 PGBD2Q6P3X8 592 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms