RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 GSAPA4D1B5 854 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 OR5K3A6NET4 321 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 LILRA5A6NI73 299 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 A8MU76 341 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 POLR3GO15318 223 aaPredicted RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 DUX1O43812 170 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 CRCPO75575 148 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 ERAL1O75616 437 aaKnown RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 CCNDBP1O95273 360 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 CLDN9O95484 217 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 IL1AP01583 271 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 SERPINE1P05121 402 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 GP1BAP07359 652 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 C1GALT1C1LP0DN25 315 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 FGF3P11487 239 aaPredicted RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 BGNP21810 368 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 HRH2P25021 359 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 CXCR2P25025 360 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 CMPK1P30085 196 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 PKLRP30613 574 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 CCKARP32238 428 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 SERPINB5P36952 375 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 ARL1P40616 181 aaPredicted RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 MDH1P40925 334 aaKnown RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 HNF4AP41235 474 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 SLC6A12P48065 614 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 SLC1A6P48664 564 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 CCNG1P51959 295 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 LIMK1P53667 647 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 ARF3P61204 181 aaPredicted RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 ABCE1P61221 599 aaKnown RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 CCL7P80098 99 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 ABATP80404 500 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 ARF1P84077 181 aaKnown RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 IRF8Q02556 426 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 IFT88Q13099 833 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 ILKQ13418 452 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 RBBP7Q16576 425 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 PDK4Q16654 411 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 CLPPQ16740 277 aaPredicted RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 HIST2H2ACQ16777 129 aaPredicted RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 XKR6Q5GH73 641 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 HIST2H2AA3Q6FI13 130 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 IRGCQ6NXR0 463 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 WDR74Q6RFH5 385 aaPredicted RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 ZCCHC23Q6ZST2 131 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 KRT74Q7RTS7 529 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 MTERF4Q7Z6M4 381 aaKnown RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 TRIM73Q86UV7 250 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 C17orf64Q86WR6 236 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 KLHDC8AQ8IYD2 350 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 CADM3Q8N126 398 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 ZNF619Q8N2I2 560 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 LINC01555Q8NAE3 123 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 SETD9Q8NE22 299 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 OR2A1Q8NGT9 310 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 B4GALNT2Q8NHY0 566 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 RAB3IL1Q8TBN0 382 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 LRRC8CQ8TDW0 803 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 TRPC4APQ8TEL6 797 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 UBTD2Q8WUN7 234 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 CKAP2Q8WWK9 683 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 SLC5A11Q8WWX8 675 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 MAGEB18Q96M61 343 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 PRAP1Q96NZ9 151 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 TGM7Q96PF1 710 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 TMEM237Q96Q45 408 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 OR2A14Q96R47 310 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 OR4K3Q96R72 315 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 CCDC3Q9BQI4 270 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 DPH7Q9BTV6 452 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 NTMT1Q9BV86 223 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 ACAT2Q9BWD1 397 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 DRC3Q9H069 523 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 ILKAPQ9H0C8 392 aaPredicted RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 LRRN3Q9H3W5 708 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 NOL11Q9H8H0 719 aaKnown RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 ACTR8Q9H981 624 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 EML4Q9HC35 981 aaKnown RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 MRPS30Q9NP92 439 aaKnown RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 SPHK1Q9NYA1 384 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 OGFRQ9NZT2 677 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 EPHA6Q9UF33 1036 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 TAC3Q9UHF0 121 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 STK38LQ9Y2H1 464 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 CLDN16Q9Y5I7 305 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 U3KQA8 63 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 CACNA1EQ15878 2313 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 IGKV2D-30A0A075B6S6 120 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 A0A0J9YY10 115 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 SLC9B1P1A6NJY1 282 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 TMEM114B3SHH9 223 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 TCP11X1B4DZS4 312 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 FAM157AC9JC47 383 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 E7EQ34 232 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 MS4A18H0YCH9 400 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 BOLA2-SMG1P6H3BVE0 249 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 OR7A17O14581 309 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 AP3D1O14617 1153 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 KLF11O14901 512 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms