RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 SLC7A2P52569 658 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 GBX2P52951 348 aaPredicted RBP3.1□□□□□ -1.91
CD44-217ENST00000525348 AIF1P55008 147 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 RBP5P82980 135 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 XIAPP98170 497 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 PMS2P3Q13401 168 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 UPP1Q16831 310 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 HYAL4Q2M3T9 481 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 CCDC58Q4VC31 144 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 ZCWPW2Q504Y3 356 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 FGD3Q5JSP0 725 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 ANKRD20A3Q5VUR7 823 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 SPOPLQ6IQ16 392 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 SCYL2Q6P3W7 929 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 CASC4Q6P4E1 433 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 DHRS11Q6UWP2 260 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 BTNL8Q6UX41 500 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 RABEPKQ7Z6M1 372 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 ADCK1Q86TW2 530 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 TPRA1Q86W33 373 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 MARCH9Q86YJ5 346 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 ZNF584Q8IVC4 421 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 OR4N5Q8IXE1 308 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 C11orf53Q8IXP5 236 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 DND1Q8IYX4 353 aaKnown RBP3.1□□□□□ -1.91
CD44-217ENST00000525348 SLC43A2Q8N370 569 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 TBC1D19Q8N5T2 526 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 ALLCQ8N6M5 410 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 TRPV1Q8NER1 839 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 OR9Q2Q8NGE9 314 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 LHFPL5Q8TAF8 219 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 TYMSOSQ8TAI1 123 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 SPPL2AQ8TCT8 520 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 NSMAFQ92636 917 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 MARC2Q969Z3 335 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 C11orf52Q96A22 123 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 VPS33AQ96AX1 596 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 LRRC39Q96DD0 335 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 SGF29Q96ES7 293 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 ZBED3Q96IU2 234 aaPredicted RBP3.1□□□□□ -1.91
CD44-217ENST00000525348 RANBP9Q96S59 729 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 ATF6BQ99941 703 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 PARD6GQ9BYG4 376 aaPredicted RBP3.1□□□□□ -1.91
CD44-217ENST00000525348 FAM192AQ9GZU8 254 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 SLC26A1Q9H2B4 701 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 HSD3B7Q9H2F3 369 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 OR51B5Q9H339 312 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 RNF41Q9H4P4 317 aaPredicted RBP3.1□□□□□ -1.91
CD44-217ENST00000525348 JPT2Q9H910 190 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 HYPKQ9NX55 129 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 ATP6V1HQ9UI12 483 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 DIMT1Q9UNQ2 313 aaKnown RBP3.1□□□□□ -1.91
CD44-217ENST00000525348 PLCL2Q9UPR0 1127 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 PIN4Q9Y237 131 aaKnown RBP3.1□□□□□ -1.91
CD44-217ENST00000525348 STK38LQ9Y2H1 464 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 CCL27Q9Y4X3 112 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 PCDH11XQ9BZA7 1347 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 RGS12O14924 1447 aa3.1□□□□□ -1.91
CD44-217ENST00000525348 CPSF1Q10570 1443 aaKnown RBP3.1□□□□□ -1.91
CD44-217ENST00000525348 ARHGAP5Q13017 1502 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 CDK13Q14004 1512 aaKnown RBP3.09□□□□□ -1.91
CD44-217ENST00000525348 RALGAPA1Q6GYQ0 2036 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 KIF14Q15058 1648 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 hCG_38984A0A1B0GV85 526 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 A0A1B0GVL5 298 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 TMEM120BA0PK00 339 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 RAB19A4D1S5 217 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 ZNF840PA6NDX5 716 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 SERINC4A6NH21 518 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 ZNF98A6NK75 572 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 A8MU10 97 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 LINC00587B1AMM8 73 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 PRSS46E5RG02 174 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 H0YCG3 227 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 H7C0C1 242 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 K7EQG2 157 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 PGRMC1O00264 195 aaKnown RBP3.09□□□□□ -1.91
CD44-217ENST00000525348 FBP2O00757 339 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 BUB1O43683 1085 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 NOL3O60936 208 aaKnown RBP3.09□□□□□ -1.91
CD44-217ENST00000525348 PRAMEF12O95522 483 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 ANP32DO95626 131 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 OPN1LWP04000 364 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 RPS17P08708 135 aaKnown RBP3.09□□□□□ -1.91
CD44-217ENST00000525348 KRT7P08729 469 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 RALAP11233 206 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 MYL6BP14649 208 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 GNSP15586 552 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 IFNAR1P17181 557 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 ERCC2P18074 760 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 TCN1P20061 433 aaPredicted RBP3.09□□□□□ -1.91
CD44-217ENST00000525348 GPR183P32249 361 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 GTF2H1P32780 548 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 GSSP48637 474 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 PITPNBP48739 271 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 HCAR3P49019 387 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 CAMLGP49069 296 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 NPY2RP49146 381 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 ERFP50548 548 aa3.09□□□□□ -1.91
CD44-217ENST00000525348 NKX2-5P52952 324 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms