RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 HPNP05981 417 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 VIMP08670 466 aaKnown RBP13.8□□□□□ -0.2
SF3B2-202ENST00000524475 RFPL3SP0C7P2 107 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 TBXA2RP21731 343 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 MATN1P21941 496 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 PTPN6P29350 595 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 KCNK10P57789 538 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 EIF2S3LQ2VIR3 472 aaKnown RBP13.8□□□□□ -0.2
SF3B2-202ENST00000524475 TIGD2Q4W5G0 525 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 CGB2Q6NT52 195 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 TRILQ7L0X0 811 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 SPPL2CQ8IUH8 684 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 OR1J4Q8NGS1 313 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 FBXO30Q8TB52 745 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 TSPEARQ8WU66 669 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 OIT3Q8WWZ8 545 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 CDS1Q92903 461 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 SLC35A5Q9BS91 424 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 YIPF4Q9BSR8 244 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 SERHL2Q9H4I8 314 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 GALNT9Q9HCQ5 603 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 SLC52A3Q9NQ40 469 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 SDHAF3Q9NRP4 125 aa13.8□□□□□ -0.2
SF3B2-202ENST00000524475 A0A1B0GUH1 482 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 A0A1W2PQD3 144 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 ALG1L2C9J202 215 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 AQP7O14520 342 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 SLC19A2O60779 497 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 CBR3O75828 277 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 UTS2O95399 124 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 CDKN2CP42773 168 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 CLK3P49761 638 aaKnown RBP13.79□□□□□ -0.2
SF3B2-202ENST00000524475 KHKP50053 298 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 ANXA11P50995 505 aaKnown RBP13.79□□□□□ -0.2
SF3B2-202ENST00000524475 C4orf17Q53FE4 359 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 DCST2Q5T1A1 773 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 HEPHL1Q6MZM0 1159 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 ANGPTL8Q6UXH0 198 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 FGD2Q7Z6J4 655 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 PLCZ1Q86YW0 608 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 FAM26EQ8N5C1 309 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 WDSUB1Q8N9V3 476 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 GTF2H4Q92759 462 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 RELTQ969Z4 430 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 SPDL1Q96EA4 605 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 INPP5KQ9BT40 448 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 TMEM120AQ9BXJ8 343 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 HOXD1Q9GZZ0 328 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 UBQLN4Q9NRR5 601 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 EXD2Q9NVH0 621 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 KLHL14Q9P2G3 628 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 MRPS18CQ9Y3D5 142 aaKnown RBP13.79□□□□□ -0.2
SF3B2-202ENST00000524475 GMEB1Q9Y692 573 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 FREM3P0C091 2139 aa13.79□□□□□ -0.2
SF3B2-202ENST00000524475 COL12A1Q99715 3063 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 NPIPB9F8W1W9 429 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 KRT75O95678 551 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 OXSR1O95747 527 aaPredicted RBP13.78□□□□□ -0.2
SF3B2-202ENST00000524475 HOXB9P17482 250 aaPredicted RBP13.78□□□□□ -0.2
SF3B2-202ENST00000524475 GDF1P27539 372 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 CHI3L1P36222 383 aaPredicted RBP13.78□□□□□ -0.2
SF3B2-202ENST00000524475 CA7P43166 264 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 ARFIP2P53365 341 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 GRAMD1BQ3KR37 738 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 ARHGAP11BQ3KRB8 267 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 LRIF1Q5T3J3 769 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 FIGNL1Q6PIW4 674 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 ZNF621Q6ZSS3 439 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 MISPQ8IVT2 679 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 FADS6Q8N9I5 356 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 OR5D16Q8NGK9 328 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 PRR7Q8TB68 274 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 ZFP90Q8TF47 636 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 VPS33AQ96AX1 596 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 THOC1Q96FV9 657 aaKnown RBP13.78□□□□□ -0.2
SF3B2-202ENST00000524475 CHMP6Q96FZ7 201 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 JSRP1Q96MG2 331 aaPredicted RBP13.78□□□□□ -0.2
SF3B2-202ENST00000524475 GNRHR2Q96P88 292 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 OR2B2Q9GZK3 357 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 NMUR2Q9GZQ4 415 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 DEFB127Q9H1M4 99 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 POLE3Q9NRF9 147 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 CCDC167Q9P0B6 97 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 OSGIN2Q9Y236 505 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 SLC5A6Q9Y289 635 aa13.78□□□□□ -0.2
SF3B2-202ENST00000524475 DIDO1Q9BTC0 2240 aaKnown RBP13.78□□□□□ -0.2
SF3B2-202ENST00000524475 SPTAN1Q13813 2472 aaKnown RBP13.78□□□□□ -0.2
SF3B2-202ENST00000524475 A0A096LPI6 279 aa13.77□□□□□ -0.21
SF3B2-202ENST00000524475 TRGV5A0A0B4J1U4 118 aa13.77□□□□□ -0.21
SF3B2-202ENST00000524475 A0A1B0GTH9 108 aa13.77□□□□□ -0.21
SF3B2-202ENST00000524475 A0A1W2PP18 115 aa13.77□□□□□ -0.21
SF3B2-202ENST00000524475 USP9YO00507 2555 aaPredicted RBP13.77□□□□□ -0.21
SF3B2-202ENST00000524475 GNB5O14775 395 aa13.77□□□□□ -0.21
SF3B2-202ENST00000524475 CDC40O60508 579 aaKnown RBP eCLIP13.77□□□□□ -0.21
SF3B2-202ENST00000524475 CELA3AP09093 270 aa13.77□□□□□ -0.21
SF3B2-202ENST00000524475 NCF2P19878 526 aaPredicted RBP13.77□□□□□ -0.21
SF3B2-202ENST00000524475 ATP6V1C1P21283 382 aa13.77□□□□□ -0.21
SF3B2-202ENST00000524475 SRD5A2P31213 254 aa13.77□□□□□ -0.21
SF3B2-202ENST00000524475 PTGS2P35354 604 aa13.77□□□□□ -0.21
SF3B2-202ENST00000524475 CASP6P55212 293 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms