RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 DEPDC7Q96QD5 511 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 COQ7Q99807 217 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 SOSTQ9BQB4 213 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 TMED9Q9BVK6 235 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 HDHD5Q9BXW7 423 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 TRIM45Q9H8W5 580 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-228ENST00000524023 MED17Q9NVC6 651 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 LYARQ9NX58 379 aaKnown RBP10.35□□□□□ -0.75
HDAC9-228ENST00000524023 NDRG2Q9UN36 371 aaKnown RBP10.35□□□□□ -0.75
HDAC9-228ENST00000524023 ATG2BQ96BY7 2078 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 PRR23AA6NEV1 266 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 DUXAA6NLW8 204 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 SCAMP1O15126 338 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 AKAP8O43823 692 aaKnown RBP10.35□□□□□ -0.75
HDAC9-228ENST00000524023 KCNJ13O60928 360 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 SLC2A10O95528 541 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 IGHA1P01876 353 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 CSF2P04141 144 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 HLA-DPB1P04440 258 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 GAAP10253 952 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 CELP19835 753 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 MYL9P24844 172 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 HTR1FP30939 366 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 SGCGQ13326 291 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 FAM214AQ32MH5 1076 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 ZNF791Q3KP31 576 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-228ENST00000524023 PUS10Q3MIT2 529 aaKnown RBP10.35□□□□□ -0.75
HDAC9-228ENST00000524023 TJAP1Q5JTD0 557 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 LCN1P1Q5VSP4 162 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 PSRC1Q6PGN9 363 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-228ENST00000524023 CNIH2Q6PI25 160 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 MTSS1LQ765P7 747 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 MARCH9Q86YJ5 346 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 KLHL36Q8N4N3 616 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 KCT2Q8NC54 265 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 OR7G2Q8NG99 324 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 OR52N1Q8NH53 320 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 SLC7A6Q92536 515 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 CDS1Q92903 461 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 C10orf90Q96M02 699 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 FRMD6Q96NE9 622 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 ATF6BQ99941 703 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 C1QTNF2Q9BXJ5 285 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 PPP1R3EQ9H7J1 279 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 RNF121Q9H920 327 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 TBC1D17Q9HA65 648 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 IL20RAQ9UHF4 553 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 CBLCQ9ULV8 474 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 ZNF443Q9Y2A4 671 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-228ENST00000524023 CSNK1G3Q9Y6M4 447 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 A0A0B4J293 547 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 SHISA3A0PJX4 238 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 GSAPA4D1B5 854 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 ISM1B1AKI9 464 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 GABRPO00591 440 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 CHST10O43529 356 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 HCN1O60741 890 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 HPGDSO60760 199 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 NCR1O76036 304 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 HLA-DQB1P01920 261 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 RPS21P63220 83 aaKnown RBP10.34□□□□□ -0.75
HDAC9-228ENST00000524023 MRPS15P82914 257 aaKnown RBP10.34□□□□□ -0.75
HDAC9-228ENST00000524023 VASNQ6EMK4 673 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 MFSD12Q6NUT3 480 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 CDC73Q6P1J9 531 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 GET4Q7L5D6 327 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-228ENST00000524023 VN1R4Q7Z5H5 301 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 UBE2J2Q8N2K1 259 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 Q8N402 240 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 OR2T33Q8NG76 320 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 SPRYD4Q8WW59 207 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-228ENST00000524023 GAL3ST3Q96A11 431 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 RNF31Q96EP0 1072 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 SECISBP2Q96T21 854 aaKnown RBP10.34□□□□□ -0.75
HDAC9-228ENST00000524023 KIR3DX1Q9H7L2 352 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 MTHFD2LQ9H903 347 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-228ENST00000524023 OBP2AQ9NY56 170 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 NLGN3Q9NZ94 848 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 NTMQ9P121 344 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 CDH10Q9Y6N8 788 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 REV3LO60673 3130 aa10.34□□□□□ -0.75
HDAC9-228ENST00000524023 SOCS6O14544 535 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 CDC42EP2O14613 210 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 RNGTTO60942 597 aaKnown RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 HMGN1P05114 100 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 SLC2A2P11168 524 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 NDUFV2P19404 249 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 IGFALSP35858 605 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 SOX9P48436 509 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 SNRPNP63162 240 aaKnown RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 ENPP2Q13822 863 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 INSL4Q14641 139 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 CDK10Q15131 360 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 P2RY14Q15391 338 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 EOGTQ5NDL2 527 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 METAP1DQ6UB28 335 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 DGLUCYQ7Z3D6 616 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 PAQR7Q86WK9 346 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 CPOQ8IVL8 374 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 PEX5LQ8IYB4 626 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms