RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 ATP6V1HQ9UI12 483 aa16.94■□□□□ 0.3
SPIDR-220ENST00000522900 H0Y3Z8 333 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 SKAP2O75563 359 aaPredicted RBP16.93■□□□□ 0.3
SPIDR-220ENST00000522900 NKX2-2O95096 273 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 UTS2O95399 124 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 ACP2P11117 423 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 LAMP1P11279 417 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 CAPN3P20807 821 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 CTSSP25774 331 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 SERPINB5P36952 375 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 ASMTP46597 345 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 DSCR4P56555 118 aaPredicted RBP16.93■□□□□ 0.3
SPIDR-220ENST00000522900 CLDN18P56856 261 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 FOXF2Q12947 444 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 RCAN2Q14206 197 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 NUDCD3Q8IVD9 361 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 SLC16A11Q8NCK7 471 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 OR5M1Q8NGP8 315 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 ZFP28Q8NHY6 868 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 SLC9A6Q92581 669 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 MTERF3Q96E29 417 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 OTUB1Q96FW1 271 aaPredicted RBP16.93■□□□□ 0.3
SPIDR-220ENST00000522900 YIPF4Q9BSR8 244 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 FAM120CQ9NX05 1096 aaKnown RBP16.93■□□□□ 0.3
SPIDR-220ENST00000522900 MRTO4Q9UKD2 239 aaKnown RBP16.93■□□□□ 0.3
SPIDR-220ENST00000522900 ABCG2Q9UNQ0 655 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 MED12Q93074 2177 aa16.93■□□□□ 0.3
SPIDR-220ENST00000522900 CLCA1A8K7I4 914 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 SCAMP2O15127 329 aaKnown RBP16.92■□□□□ 0.3
SPIDR-220ENST00000522900 RGS16O15492 202 aaPredicted RBP16.92■□□□□ 0.3
SPIDR-220ENST00000522900 CTIFO43310 598 aaKnown RBP16.92■□□□□ 0.3
SPIDR-220ENST00000522900 ZNF708P17019 499 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 HK1P19367 917 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 CHMP24386 653 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 SERPINB4P48594 390 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 ASCL1P50553 236 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 PTGR1Q14914 329 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 GRAMD1BQ3KR37 738 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 IL23RQ5VWK5 629 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 AAGABQ6PD74 315 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 SZRD1Q7Z422 152 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 ZAR1Q86SH2 424 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 ZZZ3Q8IYH5 903 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 CDRT4Q8N9R6 151 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 OR4C3Q8NH37 302 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 CEP70Q8NHQ1 597 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 SDHAF3Q9NRP4 125 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 SIRT3Q9NTG7 399 aaPredicted RBP16.92■□□□□ 0.3
SPIDR-220ENST00000522900 FBXO34Q9NWN3 711 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 POLQO75417 2590 aa16.92■□□□□ 0.3
SPIDR-220ENST00000522900 ARHGAP21Q5T5U3 1957 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 INTS1Q8N201 2190 aaKnown RBP16.91■□□□□ 0.3
SPIDR-220ENST00000522900 TTC36A6NLP5 189 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 TMEM114B3SHH9 223 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 EMC8O43402 210 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 GMFGO60234 142 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 KCNH1O95259 989 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 TMIGD3P0DMS9 266 aaPredicted RBP16.91■□□□□ 0.3
SPIDR-220ENST00000522900 DGKQP52824 942 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 CLDN15P56746 228 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 MPP2Q14168 576 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 DUSP5Q16690 384 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 ATP6AP1LQ52LC2 224 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 MFSD12Q6NUT3 480 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 LRIG3Q6UXM1 1119 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 R3HCC1LQ7Z5L2 792 aaKnown RBP16.91■□□□□ 0.3
SPIDR-220ENST00000522900 HOMEZQ8IX15 550 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 KRTCAP2Q8N6L1 136 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 FNDC5Q8NAU1 212 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 FAM110BQ8TC76 370 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 RNASE6Q93091 150 aaKnown RBP16.91■□□□□ 0.3
SPIDR-220ENST00000522900 UCN2Q96RP3 112 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 C20orf27Q9GZN8 174 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 C3orf14Q9HBI5 128 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 CRIM1Q9NZV1 1036 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 CLCF1Q9UBD9 225 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 RAB21Q9UL25 225 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 ZNF337Q9Y3M9 751 aa16.91■□□□□ 0.3
SPIDR-220ENST00000522900 A0A1W2PRB8 838 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 H0YC42 278 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 KCNK2O95069 426 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 RCBTB2O95199 551 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 ANGPTL1O95841 491 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 TGM6O95932 706 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 POU3F2P20265 443 aaPredicted RBP16.9■□□□□ 0.3
SPIDR-220ENST00000522900 MAPK1P28482 360 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 OPRM1P35372 400 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 HPCAL1P37235 193 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 KIR2DL3P43628 341 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 PSMD4P55036 377 aaKnown RBP16.9■□□□□ 0.3
SPIDR-220ENST00000522900 TPD52P55327 224 aaPredicted RBP16.9■□□□□ 0.3
SPIDR-220ENST00000522900 PRR5P85299 388 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 MLC1Q15049 377 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 CHI3L2Q15782 390 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 FBXL19-AS1Q494R0 122 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 VPS26BQ4G0F5 336 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 EXOSC6Q5RKV6 272 aaKnown RBP16.9■□□□□ 0.3
SPIDR-220ENST00000522900 CCNJQ5T5M9 372 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 FIGNL1Q6PIW4 674 aa16.9■□□□□ 0.3
SPIDR-220ENST00000522900 CDH24Q86UP0 819 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms