RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 MTHFD2LQ9H903 347 aaPredicted RBP10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 FGF20Q9NP95 211 aaPredicted RBP10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 ADAP2Q9NPF8 381 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 INIPQ9NRY2 104 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 MRPS18AQ9NVS2 196 aaKnown RBP10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 TXNL4BQ9NX01 149 aaKnown RBP10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 KLHL3Q9UH77 587 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 SLC7A7Q9UM01 511 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 SSR3Q9UNL2 185 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 PIAS3Q9Y6X2 628 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 PRUNE2Q8WUY3 3088 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 NPIPA5A0A0B4J1W7 369 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 LRRC72A6NJI9 287 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 KDM4EB2RXH2 506 aaPredicted RBP10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 NPIPA7E9PJI5 369 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 H0YGG7 62 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 CDC42EP2O14613 210 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 RGS5O15539 181 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 KLF4O43474 513 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 SSX4O60224 188 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 FGF17O60258 216 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 SLC2A10O95528 541 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 NPIPA8P0DM63 369 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 CPEP16870 476 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 MYL12AP19105 171 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 FPR3P25089 353 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 EIF2B2P49770 351 aaKnown RBP10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 ZNF136P52737 540 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 WNT4P56705 351 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 ARF3P61204 181 aaPredicted RBP10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 RPS25P62851 125 aaKnown RBP10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 RAB40BQ12829 278 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 DECR1Q16698 335 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 ARHGAP11BQ3KRB8 267 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 MINDY4Q4G0A6 757 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 ZNF628Q5EBL2 1059 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 USP53Q70EK8 1073 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 TRIM48Q8IWZ4 208 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 GJD3Q8N144 294 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 RPLP0P6Q8NHW5 317 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 GPR151Q8TDV0 419 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 ASB15Q8WXK1 588 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 PIK3R3Q92569 461 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 NR4A3Q92570 626 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 ARSGQ96EG1 525 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 CEP19Q96LK0 163 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 SLC38A2Q96QD8 506 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 SDF2Q99470 211 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 SLC30A2Q9BRI3 323 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 ANKRD19PQ9H560 264 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 CPNE5Q9HCH3 593 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 LRP4O75096 1905 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 CDRT1O95170 752 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 CELA2BP08218 269 aaPredicted RBP10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 LIMS3P0CW19 117 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 LIMS4P0CW20 117 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 PPP1CAP62136 330 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 EEF1A1P68104 462 aaKnown RBP10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 FHL5Q5TD97 284 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 C22orf42Q6IC83 251 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 LAX1Q8IWV1 398 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 PEX5LQ8IYB4 626 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 ZFP41Q8N8Y5 198 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 BBS1Q8NFJ9 593 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 ZFYVE21Q9BQ24 234 aa10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 CRNNQ9UBG3 495 aaPredicted RBP10.03□□□□□ -0.8
RAB11FIP1-204ENST00000522774 SMIM30A4D0T7 59 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 LOC110117498-PIK3R3F6TDL0 507 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 SURF4O15260 269 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 OR5F1O95221 314 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 GKN3PP0CG01 181 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 FUT1P19526 365 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 TLX1P31314 330 aaPredicted RBP10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 RORCP51449 518 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 DBPQ10586 325 aaPredicted RBP10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 ZNF542PQ5EBM4 170 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 ZMAT1Q5H9K5 638 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 DESI1Q6ICB0 168 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 ZNF620Q6ZNG0 422 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 Q6ZSR6 202 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 MBOAT2Q6ZWT7 520 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 GDPD3Q7L5L3 318 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 LHFPL3Q86UP9 236 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 ZNF761Q86XN6 746 aaPredicted RBP10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 SLC22A18ASQ8N1D0 253 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 SYT14Q8NB59 555 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 CAMKVQ8NCB2 501 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 PSD4Q8NDX1 1056 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 OR13H1Q8NG92 308 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 OR4F15Q8NGB8 312 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 ITPKCQ96DU7 683 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 STARD5Q9NSY2 213 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 TOR4AQ9NXH8 423 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 IL20Q9NYY1 176 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 PTGFRNQ9P2B2 879 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 MSRAQ9UJ68 235 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 KCNE5Q9UJ90 142 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 TCRBV21S2A2A0A5A6 115 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 TMEM129A0AVI4 362 aa10.02□□□□□ -0.81
RAB11FIP1-204ENST00000522774 PEX12O00623 359 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms