RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 MKS1Q9NXB0 559 aa16.71■□□□□ 0.27
TOP1MT-216ENST00000522121 MED11Q9P086 117 aa16.71■□□□□ 0.27
TOP1MT-216ENST00000522121 SH3BP4Q9P0V3 963 aa16.71■□□□□ 0.27
TOP1MT-216ENST00000522121 TMED5Q9Y3A6 229 aa16.71■□□□□ 0.27
TOP1MT-216ENST00000522121 C17orf51A8MQB3 221 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 AKAP10O43572 662 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 HCRTR2O43614 444 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 TBX19O60806 448 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 GOSR1O95249 250 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 DDX5P17844 614 aaKnown RBP16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 MANFP55145 182 aaKnown RBP16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 B3GALT5-AS1P59052 145 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 RPL38P63173 70 aaKnown RBP16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 KANK2Q63ZY3 851 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 OR2A2Q6IF42 318 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 ANKRD26P1Q6NSI1 321 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 PLXDC2Q6UX71 529 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 Q6ZSR9 355 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 MARCH3Q86UD3 253 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 DDIASQ8IXT1 998 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 RIBC1Q8N443 379 aaPredicted RBP16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 OR2T11Q8NH01 316 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 GPR151Q8TDV0 419 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 DUSP19Q8WTR2 217 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 TSSK3Q96PN8 268 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 PIGQQ9BRB3 760 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 YIPF4Q9BSR8 244 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 EML4Q9HC35 981 aaKnown RBP16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 HHATLQ9HCP6 504 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 GALNT8Q9NY28 637 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 FLRT3Q9NZU0 649 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 PACSIN3Q9UKS6 424 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 DNAJC15Q9Y5T4 150 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 HIVEP1P15822 2718 aa16.7■□□□□ 0.26
TOP1MT-216ENST00000522121 SLC22A20A6NK97 555 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 B4DXG7 233 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 UTS2O95399 124 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 CRHP06850 196 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 SDC1P18827 310 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 ASMTP46597 345 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 PRKAG1P54619 331 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 IFFO1Q0D2I5 559 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 C17orf67Q0P5P2 114 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 GALNTL6Q49A17 601 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 RFTN2Q52LD8 501 aaPredicted RBP16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 SZRD1Q7Z422 152 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 BANPQ8N9N5 519 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 CDRT4Q8N9R6 151 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 CHDHQ8NE62 594 aaPredicted RBP16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 OR2W6PQ8NHA6 318 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 CIDECQ96AQ7 238 aaPredicted RBP16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 FCRL1Q96LA6 429 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 LIME1Q9H400 295 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 TUBB1Q9H4B7 451 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 KIAA1549Q9HCM3 1950 aa16.69■□□□□ 0.26
TOP1MT-216ENST00000522121 ANKHD1Q8IWZ3 2542 aaKnown RBP16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 A0A1W2PNV4 684 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 GXYLT2A0PJZ3 443 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 LSM1O15116 133 aaKnown RBP16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 NPHS1O60500 1241 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 ANGPTL1O95841 491 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 TGM6O95932 706 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 FGF4P08620 206 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 ALDH3A1P30838 453 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 PRR5P85299 388 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 GLYR1Q49A26 553 aaPredicted RBP16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 R3HCC1LQ7Z5L2 792 aaKnown RBP16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 NUP43Q8NFH3 380 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 CLHC1Q8NHS4 586 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 PIK3R3Q92569 461 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 SLC9A6Q92581 669 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 MTERF3Q96E29 417 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 C1GALT1C1Q96EU7 318 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 DACH2Q96NX9 599 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 FAM111AQ96PZ2 611 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 RTN4RQ9BZR6 473 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 CXXC4Q9H2H0 198 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 ACSS1Q9NUB1 689 aaPredicted RBP16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 STOML1Q9UBI4 398 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 NDRG3Q9UGV2 375 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 BAIAP2L1Q9UHR4 511 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 PLEKHA6Q9Y2H5 1048 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 ZNF337Q9Y3M9 751 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 TRAF6Q9Y4K3 522 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 SPG11Q96JI7 2443 aa16.68■□□□□ 0.26
TOP1MT-216ENST00000522121 OR2M5A3KFT3 312 aa16.67■□□□□ 0.26
TOP1MT-216ENST00000522121 A8MXE2 369 aa16.67■□□□□ 0.26
TOP1MT-216ENST00000522121 TMEM114B3SHH9 223 aa16.67■□□□□ 0.26
TOP1MT-216ENST00000522121 H3BML4 177 aa16.67■□□□□ 0.26
TOP1MT-216ENST00000522121 CASKO14936 926 aa16.67■□□□□ 0.26
TOP1MT-216ENST00000522121 TNFRSF21O75509 655 aa16.67■□□□□ 0.26
TOP1MT-216ENST00000522121 SMNDC1O75940 238 aaKnown RBP eCLIP16.67■□□□□ 0.26
TOP1MT-216ENST00000522121 NKX2-2O95096 273 aa16.67■□□□□ 0.26
TOP1MT-216ENST00000522121 NUDT17P0C025 328 aa16.67■□□□□ 0.26
TOP1MT-216ENST00000522121 MAPK1P28482 360 aa16.67■□□□□ 0.26
TOP1MT-216ENST00000522121 RPS3AP61247 264 aaKnown RBP16.67■□□□□ 0.26
TOP1MT-216ENST00000522121 PDE7AQ13946 482 aa16.67■□□□□ 0.26
TOP1MT-216ENST00000522121 GRAMD1BQ3KR37 738 aa16.67■□□□□ 0.26
TOP1MT-216ENST00000522121 ZNF385BQ569K4 471 aa16.67■□□□□ 0.26
TOP1MT-216ENST00000522121 ARL13AQ5H913 290 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms