RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 TMEM14AQ9Y6G1 99 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 PRSS21Q9Y6M0 314 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 TNRC6CQ9HCJ0 1690 aaKnown RBP15.29■□□□□ 0.04
USP42-207ENST00000521713 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 TEX51A0A1B0GUA7 166 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 TRAPPC13A5PLN9 417 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 PSMD9O00233 223 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 RPS26P62854 115 aaKnown RBP15.29■□□□□ 0.04
USP42-207ENST00000521713 SOX17Q9H6I2 414 aaPredicted RBP15.29■□□□□ 0.04
USP42-207ENST00000521713 C13orf42A0A1B0GVH6 325 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 SMCO3A2RU48 225 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 GJE1A6NN92 205 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 C11orf98E9PRG8 122 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 RDH16O75452 317 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 CBLP22681 906 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 NKX2-5P52952 324 aaPredicted RBP15.29■□□□□ 0.04
USP42-207ENST00000521713 CHAF1BQ13112 559 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 CDKN3Q16667 212 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 PARM1Q6UWI2 310 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 CLECL1Q8IZS7 167 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 CCDC54Q8NEL0 328 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 MROH6A6NGR9 719 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 AHRP35869 848 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 MAN2A2P49641 1150 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 PIGFQ07326 219 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 MBTPS1Q14703 1052 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 COL28A1Q2UY09 1125 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 TMEM52BQ4KMG9 183 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 WDR53Q7Z5U6 358 aaPredicted RBP15.29■□□□□ 0.04
USP42-207ENST00000521713 DEFB123Q8N688 67 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 NANSQ9NR45 359 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 NPAP1Q9NZP6 1156 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 CIB4A0PJX0 185 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 ETFAP13804 333 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 SEMA3BQ13214 749 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 SF3B4Q15427 424 aaKnown RBP eCLIP15.28■□□□□ 0.044e-6■□□□□ 9.9
USP42-207ENST00000521713 LRIT3Q3SXY7 679 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 UNQ6126/PRO20091Q6UXV3 157 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 ZNF101Q8IZC7 436 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 ZSCAN4Q8NAM6 433 aaPredicted RBP15.28■□□□□ 0.04
USP42-207ENST00000521713 OR51A7Q8NH64 312 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 CITO14578 2027 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 MYH10P35580 1976 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 C2orf92A0A1B0GVN3 265 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 TCRBV5S1A1TA0A578 114 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 LYRM1O43325 122 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 ADH6P28332 368 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 CSNK1EP49674 416 aaKnown RBP15.28■□□□□ 0.04
USP42-207ENST00000521713 DESI1Q6ICB0 168 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 SIMC1Q8NDZ2 872 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 OR5K2Q8NHB8 316 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 TMIGD2Q96BF3 282 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 ZNF304Q9HCX3 659 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 ANTXRLA6NF34 631 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 PLATP00750 562 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 STSP08842 583 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 NKAPLQ5M9Q1 402 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 HS3ST5Q8IZT8 346 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 FAM109AQ8N4B1 249 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 PNPLA1Q8N8W4 532 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 OR2L8Q8NGY9 312 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 NSMAFQ92636 917 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 PBX4Q9BYU1 374 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 TMEM185BQ9H7F4 350 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 ACOT13Q9NPJ3 140 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 GNG8Q9UK08 70 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 A0A1B0GVG6 124 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 C17orf105B2RV13 164 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 CCNOP22674 350 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 XCR1P46094 333 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 CXCR4P61073 352 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 RACK1P63244 317 aaKnown RBP15.28■□□□□ 0.04
USP42-207ENST00000521713 CRYZQ08257 329 aaKnown RBP15.28■□□□□ 0.04
USP42-207ENST00000521713 OR6N2Q8NGY6 317 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 PRR11Q96HE9 360 aaPredicted RBP15.28■□□□□ 0.04
USP42-207ENST00000521713 EPHX3Q9H6B9 360 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 PTRH2Q9Y3E5 179 aaKnown RBP15.28■□□□□ 0.04
USP42-207ENST00000521713 HS3ST3A1Q9Y663 406 aa15.28■□□□□ 0.04
USP42-207ENST00000521713 A0A1W2PPL8 197 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 GXYLT2A0PJZ3 443 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 POU4F2Q12837 409 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 KCTD11Q693B1 232 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 ZNF100Q8IYN0 542 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 PGBD5Q8N414 524 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 FTMTQ8N4E7 242 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 EID2Q8N6I1 236 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 TCTN2Q96GX1 697 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 CCDC86Q9H6F5 360 aaKnown RBP15.27■□□□□ 0.04
USP42-207ENST00000521713 KCNK12Q9HB15 430 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 SACM1LQ9NTJ5 587 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 ERVK-19Q9WJR5 959 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 RGS9O75916 674 aaPredicted RBP15.27■□□□□ 0.04
USP42-207ENST00000521713 CSN2P05814 226 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 RETP07949 1114 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 S100PP25815 95 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 CDKN2CP42773 168 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 SGSHP51688 502 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 TMPPEQ6ZT21 453 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 MS4A15Q8N5U1 240 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms