RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 TMEM38AQ9H6F2 299 aa3.72□□□□□ -1.81
PVT1-211ENST00000521600 WDR26Q9H7D7 661 aa3.72□□□□□ -1.81
PVT1-211ENST00000521600 ZNF556Q9HAH1 456 aa3.72□□□□□ -1.81
PVT1-211ENST00000521600 SMURF2Q9HAU4 748 aa3.72□□□□□ -1.81
PVT1-211ENST00000521600 KRT84Q9NSB2 600 aa3.72□□□□□ -1.81
PVT1-211ENST00000521600 TAS2R9Q9NYW1 312 aa3.72□□□□□ -1.81
PVT1-211ENST00000521600 PDP1Q9P0J1 537 aaPredicted RBP3.72□□□□□ -1.81
PVT1-211ENST00000521600 SPASTQ9UBP0 616 aa3.72□□□□□ -1.81
PVT1-211ENST00000521600 CIDEBQ9UHD4 219 aa3.72□□□□□ -1.81
PVT1-211ENST00000521600 SCML1Q9UN30 329 aa3.72□□□□□ -1.81
PVT1-211ENST00000521600 ICKQ9UPZ9 632 aa3.72□□□□□ -1.81
PVT1-211ENST00000521600 TDRKHQ9Y2W6 561 aaKnown RBP3.72□□□□□ -1.81
PVT1-211ENST00000521600 SAMHD1Q9Y3Z3 626 aaKnown RBP3.72□□□□□ -1.81
PVT1-211ENST00000521600 PCDHGB3Q9Y5G1 929 aa3.72□□□□□ -1.81
PVT1-211ENST00000521600 U3KQA8 63 aa3.72□□□□□ -1.81
PVT1-211ENST00000521600 NUP214P35658 2090 aaPredicted RBP3.71□□□□□ -1.82
PVT1-211ENST00000521600 MDC1Q14676 2089 aaKnown RBP3.71□□□□□ -1.82
PVT1-211ENST00000521600 KRT87PA6NCN2 255 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 ARRDC5A6NEK1 342 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 IGLON5A6NGN9 336 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 LRRC72A6NJI9 287 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 C10orf142B7Z368 130 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 C5orf58C9J3I9 102 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 H3BMQ9 156 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 hCG_2039718K7EN88 272 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 TNFRSF11BO00300 401 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 SLC1A7O00341 560 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 MID1O15344 667 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 NDUFS4O43181 175 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 SEC14L2O76054 403 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 CLIC3O95833 236 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 ANGPTL1O95841 491 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 C6orf47O95873 294 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 KLK1P06870 262 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 IL3P08700 152 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 GIMD1P0DJR0 217 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 SFTPCP11686 197 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 ZNF28P17035 718 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 ITIH1P19827 911 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 PI3P19957 117 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 CCNA2P20248 432 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 DDCP20711 480 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 GNLYP22749 145 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 ELK4P28324 431 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 NDUFS1P28331 727 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 PPP2R1BP30154 601 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 SHMT2P34897 504 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 SOAT1P35610 550 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 TRIM23P36406 574 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 TSFMP43897 325 aaKnown RBP3.71□□□□□ -1.82
PVT1-211ENST00000521600 RAB28P51157 221 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 DUSP3P51452 185 aaPredicted RBP3.71□□□□□ -1.82
PVT1-211ENST00000521600 PDX1P52945 283 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 MAPK12P53778 367 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 NXPH1P58417 271 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 SMIM11AP58511 58 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 DSTNP60981 165 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 ISL1P61371 349 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 HBA1P69905 142 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 KCNJ10P78508 379 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 CDK6Q00534 326 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 TGM3Q08188 693 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 GAB1Q13480 694 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 GNA13Q14344 377 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 KRT33BQ14525 404 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 SSPNQ14714 243 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 NEDD8Q15843 81 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 ISXQ2M1V0 245 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 WSCD2Q2TBF2 565 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 C3orf36Q3SXR2 165 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 SPDYE7PQ495Y7 208 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 TMEM35AQ53FP2 167 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 CRB2Q5IJ48 1285 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 PRR31Q5SQ13 230 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.71□□□□□ -1.82
PVT1-211ENST00000521600 DEPDC1Q5TB30 811 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 AGBL4Q5VU57 503 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 GPR107Q5VW38 600 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 ANKRD26P1Q6NSI1 321 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 REEP3Q6NUK4 255 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 FAHD1Q6P587 224 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 BHLHB9Q6PI77 547 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.71□□□□□ -1.82
PVT1-211ENST00000521600 SLC9B2Q86UD5 537 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 CYP4Z1Q86W10 505 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 NUDT13Q86X67 352 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 ZNF547Q8IVP9 402 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 SLC25A45Q8N413 288 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 RNF175Q8N4F7 328 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 TTC29Q8NA56 475 aaPredicted RBP3.71□□□□□ -1.82
PVT1-211ENST00000521600 ATG16L2Q8NAA4 619 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 SRFBP1Q8NEF9 429 aaKnown RBP3.71□□□□□ -1.82
PVT1-211ENST00000521600 NUDT10Q8NFP7 164 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 ABHD11Q8NFV4 315 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 OR4K1Q8NGD4 311 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 OR5AR1Q8NGP9 310 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 SPPL2AQ8TCT8 520 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 GIPC3Q8TF64 312 aa3.71□□□□□ -1.82
PVT1-211ENST00000521600 IPCEF1Q8WWN9 437 aaPredicted RBP3.71□□□□□ -1.82
PVT1-211ENST00000521600 ASB12Q8WXK4 309 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms